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### Running command:
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### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:yeastCC.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings yeastCC_1.38.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.16-data-experiment/meat/yeastCC.Rcheck’
* using R version 4.2.3 (2023年03月15日)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘yeastCC/DESCRIPTION’ ... OK
* this is package ‘yeastCC’ version ‘1.38.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘yeastCC’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... WARNING
 Warning: large data file saved inefficiently:
 size ASCII compress
 spYCCmeta.rda 430Kb FALSE none
 
 Note: significantly better compression could be obtained
 by using R CMD build --resave-data
 old_size new_size compress
 breeden.rda 1.9Mb 1.5Mb xz
 spYCCES.rda 757Kb 484Kb xz
 spYCCmeta.rda 430Kb 55Kb xz
 yeastCC.rda 1.5Mb 485Kb xz
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
 ‘CellCycle98.txt’, ‘CellCycle98.xls’, ‘KnownGenes.doc’,
 ‘KnownGenes.txt’, ‘Spellmanetal.pdf’, ‘consistentFHCRC.csv’,
 ‘createYeastCC.R’, ‘orf800.txt’
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 WARNINGs, 1 NOTE
See
 ‘/home/biocbuild/bbs-3.16-data-experiment/meat/yeastCC.Rcheck/00check.log’
for details.

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### Running command:
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### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL yeastCC
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* installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’
* installing *source* package ‘yeastCC’ ...
** using staged installation
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (yeastCC)