* using log directory '/Users/biocbuild/bbs-2.7-data-experiment/meat/hapmapsnp5.Rcheck' * using R version 2.12.1 Patched (2011年01月04日 r53913) * using platform: i386-apple-darwin9.8.0 (32-bit) * using session charset: ASCII * using option '--no-vignettes' * checking for file 'hapmapsnp5/DESCRIPTION' ... OK * this is package 'hapmapsnp5' version '1.3.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'hapmapsnp5' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... OK
hapmapsnp5.Rcheck/00install.out:
* installing *source* package 'hapmapsnp5' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ... ** testing if installed package can be loaded /-------------------------------------------\ | SAMPLE HAPMAP SNP 5.0 | |-------------------------------------------| | Data obtained from http://www.hapmap.org | | This package is meant to be used only for | | demonstration of BioConductor packages. | | Access http://www.hapmap.org for details. | |-------------------------------------------| | The contents of this package are provided | | in good faith and the maintainer does not | | warrant their accuracy. | \-------------------------------------------/ * DONE (hapmapsnp5)
hapmapsnp5.Rcheck/hapmapsnp5-Ex.timings: