BioC experimental data: CHECK report for MAQCsubset on gewurz

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MAQCsubset 1.0.20
VJ Carey

Snapshot Date: 2011年04月06日 12:27:26 -0700 (Wed, 06 Apr 2011)

URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/MAQCsubset

Last Changed Rev: 1345 / Revision: 1510

Last Changed Date: 2010年10月13日 19:10:00 -0700 (Wed, 13 Oct 2010)

lamb2 Linux (openSUSE 11.2) / x86_64 OK OK

gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64 OK [ OK ] OK

petty Mac OS X Snow Leopard (10.6.6) / i386 OK OK OK

Summary

Package: MAQCsubset

Version: 1.0.20

Command: D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings MAQCsubset_1.0.20.tar.gz

StartedAt: 2011年04月06日 16:26:40 -0700 (2011年4月06日)

EndedAt: 2011年04月06日 16:30:48 -0700 (2011年4月06日)

EllapsedTime: 248.0 seconds

RetCode: 0

Status: OK

CheckDir: MAQCsubset.Rcheck

Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.7-data-experiment/meat/MAQCsubset.Rcheck'
* using R version 2.12.2 (2011年02月25日)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'MAQCsubset/DESCRIPTION' ... OK
* this is package 'MAQCsubset' version '1.0.20'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'MAQCsubset' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

MAQCsubset.Rcheck/00install.out:

* installing *source* package 'MAQCsubset' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
 Vignettes contain introductory material. To view, type
 'openVignette()'. To cite Bioconductor, see
 'citation("Biobase")' and for packages 'citation(pkgname)'.
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'lumi'
The following object(s) are masked from 'package:affy':
 MAplot, plotDensity
Creating a new generic function for "lines" in "MAQCsubset"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (MAQCsubset)

MAQCsubset.Rcheck/MAQCsubset-Ex.timings:

name user system elapsed

MAQCsubset 1.45 0.00 1.45

gehMAQCsubDef 0.52 0.00 0.52

gnfCerebHi 0.02 0.00 0.01

proboStruct-class 3.76 0.03 4.07

proboscis 2.27 0.03 2.29