* checking for working pdflatex ... OK * using log directory '/home/biocbuild/bbs-2.2-data-experiment/meat/ccTutorial.Rcheck' * using R version 2.7.2 (2008年08月25日) * using session charset: ISO8859-1 * checking for file 'ccTutorial/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'ccTutorial' version '0.9.9' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'ccTutorial' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating ccTutorial-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating ccTutorial-manual.tex ... OK * checking ccTutorial-manual.tex using pdflatex ... OK
ccTutorial.Rcheck/00install.out:
* Installing *source* package 'ccTutorial' ... ** R ** data ** inst ** help >>> Building/Updating help pages for package 'ccTutorial' Formats: text html latex example X text html latex example arrayGenesToProbeSets text html latex example barreraExpressionX text html latex example ccTutorial-package text html latex chersX text html latex example mm9g2p text html latex example mm9gene2GO text html latex example mm9genes text html latex example probeAnno text html latex example ** building package indices ... * DONE (ccTutorial)