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Package 131/133 Hostname OS / Arch BUILD CHECK BUILD BIN
yeastGSData 0.1.9
R. Gentleman
Snapshot Date: 2013年03月24日 09:15:27 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/yeastGSData
Last Changed Rev: 2168 / Revision: 2286
Last Changed Date: 2012年10月01日 10:57:19 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64 OK [ WARNINGS ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 OK WARNINGS OK
perceval Mac OS X Leopard (10.5.8) / i386 OK WARNINGS OK

Summary

Package: yeastGSData
Version: 0.1.9
Command: /home/biocbuild/bbs-2.11-bioc/R/bin/R CMD check --no-vignettes --timings yeastGSData_0.1.9.tar.gz
StartedAt: 2013年03月24日 13:32:47 -0700 (2013年3月24日)
EndedAt: 2013年03月24日 13:35:43 -0700 (2013年3月24日)
EllapsedTime: 175.3 seconds
RetCode: 0
Status: WARNINGS
CheckDir: yeastGSData.Rcheck
Warnings: 1

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/yeastGSData.Rcheck’
* using R version 2.15.3 (2013年03月01日)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘yeastGSData/DESCRIPTION’ ... OK
* this is package ‘yeastGSData’ version ‘0.1.9’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘yeastGSData’ can be installed ... OK
* checking installed package size ... NOTE
 installed size is 65.2Mb
 sub-directories of 1Mb or more:
 extdata 64.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: BayesFactorNGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorNGS.Rd:26-27: Dropping empty section \references
prepare_Rd: BayesFactorPGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorPGS.Rd:26-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
 
 Note: significantly better compression could be obtained
 by using R CMD build --resave-data
 old_size new_size compress
 BayesFactorNGS.rda 46Kb 18Kb xz
 BayesFactorPGS.rda 70Kb 32Kb xz
 MIPSGS.rda 15Kb 9Kb xz
 Mpact.rda 199Kb 136Kb bzip2
 NEGGS.rda 600Kb 40Kb xz
* checking examples ... OK
* checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
 ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/yeastGSData.Rcheck/00check.log’
for details.

yeastGSData.Rcheck/00install.out:

* installing *source* package ‘yeastGSData’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (yeastGSData)

yeastGSData.Rcheck/yeastGSData-Ex.timings:

name user system elapsed
BayesFactorNGS 0.020 0.004 0.026
BayesFactorPGS 0.004 0.000 0.007
BinaryGS 0.004 0.000 0.002
MIPSGS 0.016 0.000 0.014
Mpact 0.048 0.000 0.049
MpactEvidenceCodes 0.004 0.000 0.002
NEGGS 4.736 0.116 4.852
POSPS 0.004 0.000 0.004
PRS 0.000 0.000 0.002

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