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Package 85/122 Hostname OS / Arch BUILD CHECK BUILD BIN
miRNATarget 0.99.1
Y-h. Taguchi
Snapshot Date: 2012年09月23日 10:15:26 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/miRNATarget
Last Changed Rev: 2065 / Revision: 2159
Last Changed Date: 2012年05月11日 14:31:35 -0700 (Fri, 11 May 2012)
lamb2 Linux (openSUSE 11.4) / x86_64 OK [ OK ]
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 OK OK OK
petty Mac OS X Leopard (10.5.8) / i386 OK OK OK

Summary

Package: miRNATarget
Version: 0.99.1
Command: /home/biocbuild/bbs-2.10-bioc/R/bin/R CMD check --no-vignettes --timings miRNATarget_0.99.1.tar.gz
StartedAt: 2012年09月23日 13:29:03 -0700 (2012年9月23日)
EndedAt: 2012年09月23日 13:29:59 -0700 (2012年9月23日)
EllapsedTime: 55.6 seconds
RetCode: 0
Status: OK
CheckDir: miRNATarget.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/miRNATarget.Rcheck’
* using R version 2.15.1 (2012年06月22日)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘miRNATarget/DESCRIPTION’ ... OK
* this is package ‘miRNATarget’ version ‘0.99.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘miRNATarget’ can be installed ... OK
* checking installed package size ... NOTE
 installed size is 23.1Mb
 sub-directories of 1Mb or more:
 data 22.7Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
 ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/miRNATarget.Rcheck/00check.log’
for details.

miRNATarget.Rcheck/00install.out:

* installing *source* package ‘miRNATarget’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
 ‘miRNATarget.Rnw’ 
** testing if installed package can be loaded
* DONE (miRNATarget)

miRNATarget.Rcheck/miRNATarget-Ex.timings:

name user system elapsed
HS_conv_id 0.020 0.000 0.021
HS_refseq_to_affy_hc_g110 0.008 0.000 0.008
HS_refseq_to_affy_hg_focus 0.032 0.000 0.030
HS_refseq_to_affy_hg_u133_plus_2 0.100 0.000 0.102
HS_refseq_to_affy_hg_u133a 0.064 0.000 0.065
HS_refseq_to_affy_hg_u133a_2 0.080 0.000 0.079
HS_refseq_to_affy_hg_u133b 0.036 0.000 0.035
HS_refseq_to_affy_hg_u95a 0.04 0.00 0.04
HS_refseq_to_affy_hg_u95av2 0.036 0.004 0.038
HS_refseq_to_affy_hg_u95b 0.024 0.000 0.023
HS_refseq_to_affy_hg_u95c 0.020 0.000 0.019
HS_refseq_to_affy_hg_u95d 0.012 0.000 0.011
HS_refseq_to_affy_hg_u95e 0.016 0.000 0.017
HS_refseq_to_affy_huex_1_0_st_v2 2.456 0.056 2.511
HS_refseq_to_affy_hugene_1_0_st_v1 0.080 0.000 0.079
HS_refseq_to_affy_hugenefl 0.028 0.000 0.025
HS_refseq_to_affy_u133_x3p 0.340 0.004 0.346
HS_refseq_to_agilent_cgh_44b 0.02 0.00 0.02
HS_refseq_to_agilent_wholegenome 0.072 0.000 0.073
HS_refseq_to_canonical_transcript_stable_id 0.060 0.008 0.068
HS_refseq_to_ccds 0.052 0.000 0.053
HS_refseq_to_codelink 0.056 0.004 0.061
HS_refseq_to_embl 0.328 0.008 0.336
HS_refseq_to_ensembl_gene_id 0.064 0.008 0.073
HS_refseq_to_ensembl_peptide_id 0.088 0.004 0.091
HS_refseq_to_ensembl_transcript_id 0.096 0.000 0.100
HS_refseq_to_entrezgene 0.068 0.004 0.068
HS_refseq_to_hgnc_id 0.064 0.000 0.066
HS_refseq_to_hgnc_symbol 0.064 0.004 0.070
HS_refseq_to_hgnc_transcript_name 0.096 0.004 0.097
HS_refseq_to_illumina_humanht_12 0.088 0.004 0.090
HS_refseq_to_illumina_humanwg_6_v1 0.072 0.004 0.075
HS_refseq_to_illumina_humanwg_6_v2 0.068 0.004 0.071
HS_refseq_to_illumina_humanwg_6_v3 0.084 0.000 0.085
HS_refseq_to_interpro 0.260 0.004 0.262
HS_refseq_to_ipi 0.124 0.000 0.122
HS_refseq_to_merops 0.008 0.000 0.007
HS_refseq_to_pdb 0.040 0.004 0.044
HS_refseq_to_pfam 0.068 0.004 0.072
HS_refseq_to_phalanx_onearray 0.068 0.004 0.074
HS_refseq_to_protein_id 0.320 0.008 0.326
HS_refseq_to_refseq_dna 0.068 0.000 0.068
HS_refseq_to_refseq_genomic 0.004 0.000 0.002
HS_refseq_to_refseq_peptide 0.092 0.000 0.092
HS_refseq_to_rfam 0.004 0.000 0.005
HS_refseq_to_rfam_gene_name 0.004 0.000 0.001
HS_refseq_to_rfam_transcript_name 0.004 0.000 0.002
HS_refseq_to_smart 0.048 0.000 0.051
HS_refseq_to_tigrfam 0.004 0.000 0.006
HS_refseq_to_ucsc 0.080 0.012 0.089
HS_refseq_to_unigene 0.240 0.000 0.239
HS_refseq_to_uniprot_genename 0.096 0.000 0.098
HS_refseq_to_wikigene_name 0.068 0.000 0.069
MM_conv_id 0.004 0.000 0.005
MM_refseq_to_affy_mg_u74a 0.024 0.004 0.029
MM_refseq_to_affy_mg_u74av2 0.024 0.004 0.029
MM_refseq_to_affy_mg_u74b 0.020 0.000 0.023
MM_refseq_to_affy_mg_u74bv2 0.024 0.000 0.023
MM_refseq_to_affy_mg_u74c 0.008 0.000 0.008
MM_refseq_to_affy_mg_u74cv2 0.008 0.000 0.010
MM_refseq_to_affy_moe430a 0.056 0.000 0.056
MM_refseq_to_affy_moe430b 0.276 0.000 0.279
MM_refseq_to_affy_moex_1_0_st_v1 1.096 0.016 1.113
MM_refseq_to_affy_mogene_1_0_st_v1 0.068 0.000 0.066
MM_refseq_to_affy_mouse430_2 0.072 0.000 0.073
MM_refseq_to_affy_mouse430a_2 0.048 0.000 0.050
MM_refseq_to_affy_mu11ksuba 0.020 0.000 0.018
MM_refseq_to_affy_mu11ksubb 0.012 0.000 0.012
MM_refseq_to_agilent_wholegenome 0.064 0.000 0.061
MM_refseq_to_canonical_transcript_stable_id 0.056 0.004 0.061
MM_refseq_to_ccds 0.048 0.000 0.048
MM_refseq_to_codelink 0.048 0.000 0.049
MM_refseq_to_embl 0.276 0.008 0.284
MM_refseq_to_ensembl_gene_id 0.052 0.004 0.058
MM_refseq_to_ensembl_peptide_id 0.060 0.000 0.058
MM_refseq_to_ensembl_transcript_id 0.212 0.000 0.212
MM_refseq_to_entrezgene 0.056 0.000 0.057
MM_refseq_to_fantom 0.076 0.000 0.078
MM_refseq_to_illumina_mousewg_6_v1 0.076 0.000 0.074
MM_refseq_to_illumina_mousewg_6_v2 0.08 0.00 0.08
MM_refseq_to_interpro 0.108 0.004 0.115
MM_refseq_to_ipi 0.280 0.000 0.282
MM_refseq_to_merops 0.004 0.004 0.006
MM_refseq_to_mgi_id 0.056 0.000 0.055
MM_refseq_to_mgi_symbol 0.056 0.000 0.056
MM_refseq_to_mgi_transcript_name 0.060 0.000 0.059
MM_refseq_to_pdb 0.008 0.000 0.006
MM_refseq_to_pfam 0.056 0.000 0.056
MM_refseq_to_phalanx_onearray 0.048 0.004 0.050
MM_refseq_to_protein_id 0.188 0.004 0.193
MM_refseq_to_refseq_dna 0.048 0.000 0.048
MM_refseq_to_refseq_peptide 0.060 0.000 0.063
MM_refseq_to_rfam 0.004 0.000 0.002
MM_refseq_to_rfam_gene_name 0.000 0.000 0.002
MM_refseq_to_rfam_transcript_name 0.000 0.004 0.002
MM_refseq_to_smart 0.036 0.000 0.036
MM_refseq_to_tigrfam 0.004 0.000 0.005
MM_refseq_to_ucsc 0.052 0.000 0.050
MM_refseq_to_unigene 0.076 0.000 0.075
MM_refseq_to_uniprot_genename 0.076 0.000 0.073
MM_refseq_to_wikigene_name 0.056 0.000 0.057
TBL2 1.820 0.116 1.933
TBL2_HS 3.449 0.204 3.652
TBL2_MM 1.564 0.164 1.727
conv_id 0.004 0.000 0.005
id_conv 0.052 0.004 0.052

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