* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/ggtut.Rcheck’
* using R version 2.15.1 (2012年06月22日)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ggtut/DESCRIPTION’ ... OK
* this is package ‘ggtut’ version ‘0.0.42’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘ggtut’ can be installed ... OK
* checking installed package size ... NOTE
 installed size is 228.7Mb
 sub-directories of 1Mb or more:
 bam 15.1Mb
 data 22.3Mb
 doc 8.2Mb
 ffarchives 129.9Mb
 ffobjects 1.6Mb
 images 12.9Mb
 sqlite 38.0Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
getFixedBFL: warning in dir(system.file("bam", package = "ggtut"), patt
 = "bam$", full = TRUE): partial argument match of 'patt' to 'pattern'
getFixedBFL: warning in dir(system.file("bam", package = "ggtut"), patt
 = "bam$", full = TRUE): partial argument match of 'full' to
 'full.names'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
 ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/ggtut.Rcheck/00check.log’
for details.

* installing *source* package ‘ggtut’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import ‘space’ when loading ‘IRanges’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import ‘space’ when loading ‘IRanges’
* DONE (ggtut)