* using log directory '/Users/biocbuild/bbs-2.10-data-experiment/meat/estrogen.Rcheck' * using R version 2.15.1 (2012年06月22日) * using platform: i386-apple-darwin9.8.0 (32-bit) * using session charset: ASCII * using option '--no-vignettes' * checking for file 'estrogen/DESCRIPTION' ... OK * this is package 'estrogen' version '1.8.8' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'estrogen' can be installed ... OK * checking installed package size ... NOTE installed size is 83.2Mb sub-directories of 1Mb or more: extdata 82.4Mb * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... NOTE The following files should probably not be installed: 'bioCexercises.sty' Consider the use of a .Rinstignore file: see 'Writing R Extensions', or move the vignette sources from 'inst/doc' to 'vignettes'. * checking examples ... NONE * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignettes ... SKIPPED * checking PDF version of manual ... OK NOTE: There were 2 notes. See '/Users/biocbuild/bbs-2.10-data-experiment/meat/estrogen.Rcheck/00check.log' for details.
estrogen.Rcheck/00install.out:
* installing *source* package 'estrogen' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes 'estrogen.Rnw' ** testing if installed package can be loaded * DONE (estrogen)