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Package 31/122 Hostname OS / Arch BUILD CHECK BUILD BIN
dressCheck 0.1.5
Vincent Carey
Snapshot Date: 2012年09月23日 10:15:26 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/dressCheck
Last Changed Rev: 2037 / Revision: 2159
Last Changed Date: 2012年03月30日 15:20:09 -0700 (Fri, 30 Mar 2012)
lamb2 Linux (openSUSE 11.4) / x86_64 OK [ OK ]
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 OK OK OK
petty Mac OS X Leopard (10.5.8) / i386 OK OK OK

Summary

Package: dressCheck
Version: 0.1.5
Command: /home/biocbuild/bbs-2.10-bioc/R/bin/R CMD check --no-vignettes --timings dressCheck_0.1.5.tar.gz
StartedAt: 2012年09月23日 12:40:13 -0700 (2012年9月23日)
EndedAt: 2012年09月23日 12:40:54 -0700 (2012年9月23日)
EllapsedTime: 41.6 seconds
RetCode: 0
Status: OK
CheckDir: dressCheck.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/dressCheck.Rcheck’
* using R version 2.15.1 (2012年06月22日)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘dressCheck/DESCRIPTION’ ... OK
* this is package ‘dressCheck’ version ‘0.1.5’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘dressCheck’ can be installed ... OK
* checking installed package size ... NOTE
 installed size is 65.9Mb
 sub-directories of 1Mb or more:
 data 54.4Mb
 sampleRemap 11.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DrAsGiven.Rd:69-71: Dropping empty section \details
prepare_Rd: DrAsGiven.Rd:72-74: Dropping empty section \source
prepare_Rd: DrAsGiven.Rd:75-77: Dropping empty section \references
prepare_Rd: E2F3sig.probes.Rd:16-18: Dropping empty section \details
prepare_Rd: E2F3sig.probes.Rd:19-21: Dropping empty section \source
prepare_Rd: E2F3sig.probes.Rd:22-24: Dropping empty section \references
prepare_Rd: Src.probes.Rd:17-19: Dropping empty section \details
prepare_Rd: Src.probes.Rd:20-22: Dropping empty section \source
prepare_Rd: Src.probes.Rd:23-25: Dropping empty section \references
prepare_Rd: c119.Rd:97-99: Dropping empty section \source
prepare_Rd: c119.Rd:100-102: Dropping empty section \references
prepare_Rd: corrp116.Rd:71-73: Dropping empty section \details
prepare_Rd: corrp116.Rd:74-76: Dropping empty section \source
prepare_Rd: corrp116.Rd:77-79: Dropping empty section \references
prepare_Rd: e2f3Wts.Rd:19-21: Dropping empty section \details
prepare_Rd: e2f3Wts.Rd:22-24: Dropping empty section \source
prepare_Rd: e2f3Wts.Rd:25-27: Dropping empty section \references
prepare_Rd: platsigprobes.Rd:17-19: Dropping empty section \details
prepare_Rd: platsigprobes.Rd:20-22: Dropping empty section \source
prepare_Rd: platsigprobes.Rd:23-25: Dropping empty section \references
prepare_Rd: pwLines.Rd:127-129: Dropping empty section \details
prepare_Rd: pwLines.Rd:130-132: Dropping empty section \source
prepare_Rd: pwLines.Rd:133-135: Dropping empty section \references
prepare_Rd: srcWts.Rd:19-21: Dropping empty section \details
prepare_Rd: srcWts.Rd:22-24: Dropping empty section \source
prepare_Rd: srcWts.Rd:25-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... NOTE
The following files should probably not be installed:
 ‘mismatch.tex’
Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
NOTE: There were 3 notes.
See
 ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/dressCheck.Rcheck/00check.log’
for details.

dressCheck.Rcheck/00install.out:

* installing *source* package ‘dressCheck’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
 ‘short.Rnw’ 
** testing if installed package can be loaded
* DONE (dressCheck)

dressCheck.Rcheck/dressCheck-Ex.timings:

name user system elapsed
DrAsGiven 1.016 0.024 1.038
E2F3sig.probes 0.004 0.000 0.002
Src.probes 0.000 0.000 0.002
c119 1.676 0.088 1.785
corrp116 0.972 0.036 1.010
e2f3Wts 0.000 0.000 0.002
platsigprobes 0.000 0.004 0.002
pwLines 2.476 0.076 2.551
srcWts 0.000 0.000 0.002

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