* using log directory 'E:/biocbld/bbs-2.10-data-experiment/meat/SpikeInSubset.Rcheck' * using R version 2.15.1 (2012年06月22日) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'SpikeInSubset/DESCRIPTION' ... OK * this is package 'SpikeInSubset' version '1.2.11' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'SpikeInSubset' can be installed ... WARNING Found the following significant warnings: Warning: E:/biocbld/bbs-2.10-data-experiment/tmpdir/RtmpeMdgOe/R.INSTALL414722364ef/SpikeInSubset/man/xhyb.Rd: docType 'instance' is unrecognized See 'E:/biocbld/bbs-2.10-data-experiment/meat/SpikeInSubset.Rcheck/00install.out' for details. * checking installed package size ... NOTE installed size is 20.5Mb sub-directories of 1Mb or more: data 20.4Mb * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... WARNING prepare_Rd: xhyb.Rd: docType 'instance' is unrecognized * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... WARNING Note: significantly better compression could be obtained by using R CMD build --resave-data old_size new_size compress hgu133a.spikein.xhyb.rda 12Kb 2Kb gzip mas133.rda 2.2Mb 990Kb xz mas95.rda 1.3Mb 574Kb xz rma133.rda 2.2Mb 895Kb xz rma95.rda 1.3Mb 522Kb xz spikein133.rda 7.3Mb 4.3Mb xz spikein95.rda 6.1Mb 3.6Mb xz * checking examples ... NONE * checking PDF version of manual ... OK WARNING: There were 3 warnings. NOTE: There was 1 note. See 'E:/biocbld/bbs-2.10-data-experiment/meat/SpikeInSubset.Rcheck/00check.log' for details.
SpikeInSubset.Rcheck/00install.out:
install for i386 * installing *source* package 'SpikeInSubset' ... ** R ** data ** preparing package for lazy loading ** help Warning: E:/biocbld/bbs-2.10-data-experiment/tmpdir/RtmpeMdgOe/R.INSTALL414722364ef/SpikeInSubset/man/xhyb.Rd: docType 'instance' is unrecognized *** installing help indices ** building package indices ** testing if installed package can be loaded install for x64 * installing *source* package 'SpikeInSubset' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SpikeInSubset' as SpikeInSubset_1.2.11.zip * DONE (SpikeInSubset)