* using log directory '/Users/biocbuild/bbs-2.10-data-experiment/meat/RnaSeqTutorial.Rcheck'
* using R version 2.15.1 (2012年06月22日)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'RnaSeqTutorial/DESCRIPTION' ... OK
* this is package 'RnaSeqTutorial' version '0.0.10'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'RnaSeqTutorial' can be installed ... OK
* checking installed package size ... NOTE
 installed size is 45.0Mb
 sub-directories of 1Mb or more:
 extdata 44.1Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
 '/Users/biocbuild/bbs-2.10-data-experiment/meat/RnaSeqTutorial.Rcheck/00check.log'
for details.

* installing *source* package 'RnaSeqTutorial' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
 'RnaSeqTutorial.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import 'coerce' when loading 'intervals'
Warning: replacing previous import 'initialize' when loading 'intervals'
* DONE (RnaSeqTutorial)