* using log directory 'E:/biocbld/bbs-2.10-data-experiment/meat/CCl4.Rcheck'
* using R version 2.15.1 (2012年06月22日)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'CCl4/DESCRIPTION' ... OK
* this is package 'CCl4' version '1.0.12'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'CCl4' can be installed ... OK
* checking installed package size ... NOTE
installed size is 298.6Mb
sub-directories of 1Mb or more:
data 6.2Mb
extdata 292.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
CCl4.RData 3.3Mb 2.1Mb xz
CCl4_RGList.RData 2.9Mb 2.0Mb xz
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386'
Running 'validDataFiles.R'
Comparing 'validDataFiles.Rout' to 'validDataFiles.Rout.save' ...5,17d4
< Attaching package: 'BiocGenerics'
<
< The following object(s) are masked from 'package:stats':
<
< xtabs
<
< The following object(s) are masked from 'package:base':
<
< Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
< colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
< order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
< rownames, sapply, setdiff, table, tapply, union, unique
<
20,22c7,9
< Vignettes contain introductory material; view with
< 'browseVignettes()'. To cite Bioconductor, see
< 'citation("Biobase")', and for packages 'citation("pkgname")'.
---
> Vignettes contain introductory material. To view, type
> 'openVignette()'. To cite Bioconductor, see
> 'citation("Biobase")' and for packages 'citation(pkgname)'.
OK
** running tests for arch 'x64'
Running 'validDataFiles.R'
Comparing 'validDataFiles.Rout' to 'validDataFiles.Rout.save' ...5,17d4
< Attaching package: 'BiocGenerics'
<
< The following object(s) are masked from 'package:stats':
<
< xtabs
<
< The following object(s) are masked from 'package:base':
<
< Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
< colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
< order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
< rownames, sapply, setdiff, table, tapply, union, unique
<
20,22c7,9
< Vignettes contain introductory material; view with
< 'browseVignettes()'. To cite Bioconductor, see
< 'citation("Biobase")', and for packages 'citation("pkgname")'.
---
> Vignettes contain introductory material. To view, type
> 'openVignette()'. To cite Bioconductor, see
> 'citation("Biobase")' and for packages 'citation(pkgname)'.
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There was 1 note.
See
'E:/biocbld/bbs-2.10-data-experiment/meat/CCl4.Rcheck/00check.log'
for details.
CCl4.Rcheck/00install.out:
install for i386 * installing *source* package 'CCl4' ... ** data ** inst ** help *** installing help indices ** building package indices ** installing vignettes 'CCl4.Rnw' ** testing if installed package can be loaded install for x64 * installing *source* package 'CCl4' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CCl4' as CCl4_1.0.12.zip * DONE (CCl4)