Learn how to use the Alignment_Projects serial section aligner.

This small, but general, real-world example will teach you how to align EM or optical data.

Included:

• A tiny optical array tomography stack.
• Complete instructions for setting and tuning parameters.
• Complete instructions for every pipeline step.
• Complete output for your reference.

Requirements:

• I assume you've already installed the aligner!
• Fiji + TrakEM2: invaluable image and stack tools.

Start Here:

Docs/tutorial.md.

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