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Maize Genetics Meeting

Archive

SNPversity 2.0
SNPversity: A tool to access large-scale maize genetic variation data.
TYPSimSelector
TYPSimSelector: A tool that sorts identity-by-state values derived from SNP datasets for accessions in the Ames Diversity Panel (a USDA-maintained set of maize lines representing wide genetic variation in Ames, Iowa).
PanEffect
PanEffect: A tool to explore the variant effects across the maize pan-genome.

Bin viewer
Bin Viewer: A tool to explore data in regions defined by genetic bins.
GenomeQC
GenomeQC: A tool to assess the quality of genome assemblies and annotations.
Maize Feature Store
MFS: A centralized resource to manage and analyze curated maize multi-omics features for machine learning applications.

Pedigree Viewer
Pedigree Viewer: A tool to visualize maize pedigree data and networks.
PAST
PAST: A tool that assigns your SNPs to genes and your genes to metabolic pathways.
Genome Context Viewer
GCV: A web-app that visualizes genomic context data in a single, federated interface by using functional annotations as a unit of search and comparison.