References Associated with Literature Topic: Fungal Related Genes/Proteins

Reference	Species	Genes Addressed
*Gao L, et al.* (2025)** In vitro and in vivo activity of 1,2,3,4,6-O-pentagalloyl-glucose against Candida albicans. Antimicrob Agents Chemother :e0177524 CGD Papers Entry Pubmed Entry	C. albicans	\|ENO1
*Gutzmann DJ, et al.* (2025)** Cwh8 moonlights as a farnesyl pyrophosphate phosphatase and is essential for farnesol biosynthesis in Candida albicans. MBio :e0229025 CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|ALD6 \|ARE2 \|ARG11 \|BIO2 \|BTA1 \|CCC1 \|CDR1 \|CEK2 \|CRH11 \|CWH8 \|DAL52 \|DIP5 \|DPP1 \|DPP2 \|MORE
*Levi O, et al.* (2025)** Genome-wide CRISPRi screen and proteomic profiling identify key genes related to ferulic acid's antifungal activity. mBio :e0190925 CGD Papers Entry Pubmed Entry	C. albicans	\|ERG11 \|TAC1
*Bergin S, et al.* (2024)** Analysis of clinical Candida parapsilosis isolates reveals copy number variation in key fluconazole resistance genes. Antimicrob Agents Chemother :e0161923 CGD Papers Entry Pubmed Entry Web Supplement Data	C. parapsilosis	\|CDR1 \|CDR1B \|ERG11 \|MDR1 \|MDR1B \|MRR1
*Nysten J, et al.* (2024)** The riboflavin biosynthetic pathway as a novel target for antifungal drugs against Candida species. mBio :e0250224 CGD Papers Entry Pubmed Entry	C. albicans	\|C1_06510C_A \|C2_02580W_A \|C4_02510W_A \|C6_03540W_A \|RIB1 \|RIB2 \|RIB3 \|RIB4 \|RIB5 \|RIB7 \|RUT1
C. glabrata	\|RIB1 \|RIB2 \|RIB3 \|RIB4 \|RIB5 \|RIB7
*Rai LS, et al.* (2024)** Metabolic reprogramming during Candida albicans planktonic-biofilm transition is modulated by the transcription factors Zcf15 and Zcf26. PLoS Biol 22(6):e3002693 CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|C4_02190C_A \|ECE1 \|HWP1 \|HYR1 \|INO1 \|ZCF15 \|ZCF26
*Wu H, et al.* (2024)** Isobavachalcone Exhibits Potent Antifungal Efficacy by Inhibiting Enolase Activity and Glycolysis in Candida albicans. ACS Infect Dis CGD Papers Entry Pubmed Entry	C. albicans	\|ENO1
*Cui G, et al.* (2022)** Aminotransferase SsAro8 Regulates Tryptophan Metabolism Essential for Filamentous Growth of Sugarcane Smut Fungus Sporisorium scitamineum. Microbiol Spectr :e0057022 CGD Papers Entry Pubmed Entry
*James SA, et al.* (2022)** The Cynomolgus Macaque Intestinal Mycobiome Is Dominated by the Kazachstania Genus and K. pintolopesii Species. J Fungi (Basel) 8(10) CGD Papers Entry Pubmed Entry
*Khatoon R, et al.* (2022)** Genomic landscape of the DHA1 family in Candida auris and mapping substrate repertoire of CauMdr1. Appl Microbiol Biotechnol 106(21):7085-7097 CGD Papers Entry Pubmed Entry	C. auris	\|MDR1
*Blancett LT, et al.* (2021)** Deletion of the Stress Response Gene DDR48 from Histoplasma capsulatum Increases Sensitivity to Oxidative Stress, Increases Susceptibility to Antifungals, and Decreases Fitness in Macrophages. J Fungi (Basel) 7(11) CGD Papers Entry Pubmed Entry
*Li Z, et al.* (2021)** Small-molecule inhibitors for the Prp8 intein as antifungal agents Proc Natl Acad Sci U S A 118:e2008815118 CGD Papers Entry Pubmed Entry
*Ordiales H, et al.* (2021)** Glycosaminoglycans Are Involved in the Adhesion of Candida albicans and Malassezia Species to Keratinocytes But Not to Dermal Fibroblasts. Actas Dermosifiliogr (Engl Ed) CGD Papers Entry Pubmed Entry
*Qiu L, et al.* (2021)** BbWor1, a Regulator of Morphological Transition, Is Involved in Conidium-Hypha Switching, Blastospore Propagation, and Virulence in Beauveria bassiana. Microbiol Spectr 9(1):e0020321 CGD Papers Entry Pubmed Entry
*Shu T, et al.* (2021)** The pH-Responsive Transcription Factors YlRim101 and Mhy1 Regulate Alkaline pH-Induced Filamentation in the Dimorphic Yeast Yarrowia lipolytica. mSphere 6(3) CGD Papers Entry Pubmed Entry
*Wallace EWJ, et al.* (2020)** Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom. Nucleic Acids Res 48(5):2312-2331 CGD Papers Entry Pubmed Entry
McCarthy CGP and Fitzpatrick DA (2019) Pan-genome analyses of model fungal species. Microb Genom 5(2) CGD Papers Entry Pubmed Entry Web Supplement Data
*Hussain QA, et al.* (2015)** Regulation of adrenomedullin and nitric oxide production by periodontal bacteria. J Periodontal Res 50(5):650-7 CGD Papers Entry Pubmed Entry
*Chalupova J, et al.* (2014)** Identification of fungal microorganisms by MALDI-TOF mass spectrometry. Biotechnol Adv 32(1):230-41 CGD Papers Entry Pubmed Entry
Davies GE and Thornton CR (2014) Differentiation of the emerging human pathogens Trichosporon asahii and Trichosporon asteroides from other pathogenic yeasts and moulds by using species-specific monoclonal antibodies. PLoS One 9(1):e84789 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT Reference LINKOUT
*Park EH, et al.* (2012)** Cloning and functional verification of the Candida milleri HIS3 gene encoding imidazoleglycerol phosphate dehydratase. J Microbiol Biotechnol 22(10):1441-5 CGD Papers Entry Pubmed Entry
*Park EH, et al.* (2011)** Cloning and characterization of a glyoxalase I gene from the osmotolerant yeast Candida magnoliae. J Microbiol Biotechnol 21(3):277-83 CGD Papers Entry Pubmed Entry Reference LINKOUT
*Klis FM, et al.* (2010)** Covalently linked wall proteins in ascomycetous fungi. Yeast 27(8):489-93 CGD Papers Entry Pubmed Entry Reference LINKOUT	C. albicans	\|ALS1 \|ALS1 \|ALS10 \|ALS11 \|ALS12 \|ALS2 \|ALS2 \|ALS3 \|ALS3 \|ALS4 \|ALS4 \|ALS5 \|ALS5 \|ALS6 \|MORE
*Ghannoum MA, et al.* (2009)** Differential in vitro activity of anidulafungin, caspofungin and micafungin against Candida parapsilosis isolates recovered from a burn unit. Clin Microbiol Infect 15(3):274-9 CGD Papers Entry Pubmed Entry Reference LINKOUT	C. parapsilosis	\|FKS1
*Boisnard S, et al.* (2008)** Role of Sho1p adaptor in the pseudohyphal development, drugs sensitivity, osmotolerance and oxidant stress adaptation in the opportunistic yeast Candida lusitaniae. Yeast 25(11):849-59 CGD Papers Entry Pubmed Entry Reference LINKOUT
*Paraje MG, et al.* (2008)** Candida albicans-secreted lipase induces injury and steatosis in immune and parenchymal cells. Can J Microbiol 54(8):647-59 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT
*Swaim CL, et al.* (2008)** Physical and computational analysis of the yeast Kluyveromyces lactis secreted proteome. Proteomics 8(13):2714-23 CGD Papers Entry Pubmed Entry Reference LINKOUT
Noble SM and Johnson AD (2007) Genetics of Candida albicans, a diploid human fungal pathogen. Annu Rev Genet 41:193-211 CGD Papers Entry Pubmed Entry Reference LINKOUT	C. albicans	\|ARG4 \|ARG4 \|MAL2 \|MAL2 \|MET3 \|MET3 \|URA3 \|URA3
Poyatos JF and Hurst LD (2007) The determinants of gene order conservation in yeasts. Genome Biol 8(11):R233 CGD Papers Entry Pubmed Entry
*Daum G, et al.* (1998)** Biochemistry, cell biology and molecular biology of lipids of Saccharomyces cerevisiae. Yeast 14(16):1471-510 CGD Papers Entry Pubmed Entry Reference LINKOUT

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