CASTp 3.0: Computed Atlas of Surface Topography of proteins

CASTp

Computed Atlas of Surface Topography of proteins

Please cite this paper if you publish or present results using CASTp analysis: Tian et al., Nucleic Acids Res. 2018. PMID: 29860391 DOI: 10.1093/nar/gky473.

The enhanced CASTp(CASTpFold) server with new features for the whole protein universe is online, check here: CASTpFold
For questions and bugs, please contact uic.lianglab{at}gmail.com .

PDB or job ID

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Other assembly help {{assemid}}

PocID help	Area (SA) Å²	Volume (SA) Å³
{{poc.id}}	{{poc.area}}	{{poc .vol}}

PocID	Chain	SeqID	AA	Atom
{{atom.pocid}}	{{atom.ch}}	{{atom.seqid}}	{{atom.aa}}	{{atom.atom}}

Sequence α-helix β-bridge strand

3₁₀ helix π-helix turn

bend coil no structure

annotated displayed
"> help

Chain {{chaindata.chain}}

{{x.aa}}

Features

Feature Position(s) Description Reference

{{feat.ft}} {{feat.ch}}: {{feat.pos}} {{feat.dscr}} Uniprot: {{feat.spid}}

publish

help_outline

Configure the visualization of pockets

Show Pocket ID Area (SA) Volume (SA) help Negative Volume Color Representation Style

{{poc.id}} {{pocdata[poc.id-1].info.area}} {{pocdata[poc.id-1].info.vol}}

warning Volumne and/or surface rendering for large pockets may cause high usage of memory and CPU.