Life Science Database Archive
RPSD

Database Description

General information of database

info Database name RPSD
info Alternative name Rice Protein Structure Database
info Creator
Creator Name:
Toshimasa Yamazaki
Creator Affiliation:
National Institute of Agrobiological Sciences
info Contact address

2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
National Institute of Agrobiological Sciences
Toshimasa Yamazaki
E-mail : rpsd ad

info Database classification Structure Databases - Protein structure
info Organism
Taxonomy Name:
Oryza sativa
Taxonomy ID:
Taxonomy Name:
Sorghum bicolor
Taxonomy ID:
Taxonomy Name:
Zea mays
Taxonomy ID:
Taxonomy Name:
Hordeum vulgare
Taxonomy ID:
Taxonomy Name:
Triticum aestivum
Taxonomy ID:
Taxonomy Name:
Arabidopsis thaliana
Taxonomy ID:
Taxonomy Name:
Glycine max
Taxonomy ID:
info Database description

We have determined the three-dimensional structures of the protein of seven kinds of plants such as rice, and have put together the result and related informations. This database contains the basic information of the protein, that assumed Protein Data Bank a source of information, experimental methods used for the structure determination, literature information, sequence, the image of the three-dimensional structures, and so on.

info Features and manner of utilization of database

A purpose of this study is to elucidate the correlation of "the three-dimensional structures and a function and phenotype of the protein" and the mechanisms of functional expression of the protein, in the resolving power of the atomic level, about the gene which is assumed to be important academically or agriculturally and industrially, utilizing gene information, full-length cDNA, and so on, which was provided by the rice genome project, for general elucidation of the rice plant function and development of a policy to use a useful gene effectively. In this site, you can search the three-dimensional structures of the protein listed by each plant.

info License CC BY-SA Detail
info Background and funding
Name:
An isolation and function elucidation using structure analysis of the protein (2002-2004, National Institute of Agrobiological Science (NIAS))
info Reference(s)
Article title:
Author name(s):
Journal:
External Links:

Original website information

info Database maintenance site

*The original website is unavailable.

info URL of the original website -
info Operation start date -
info Last update date 2005年2月14日
info Whole data download -
info Referenced database

ENA
InterPro
MaizeGDB
PDBj
PROSITE
Pfam
SGD
SWISS-2DPAGE

info Entry list Available
info Query search Not available
info Web services Not available
info URL of Web services -
info Need for user registration Not available

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