copa

Functions to perform cancer outlier profile analysis.

COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.

Author James W. MacDonald

Maintainer James W. MacDonald

To install this package, start R and enter:

 source("http://bioconductor.org/biocLite.R")
 biocLite("copa")

Documentation

Package Downloads

copa Overview

Reference Manual

Package source	copa_1.10.0.tar.gz
Windows binary	copa_1.10.0.zip
MacOS X 10.4 (Tiger) binary	copa_1.10.0.tgz
MacOS X 10.5 (Leopard) binary	copa_1.10.0.tgz
Package Downloads Report	Downloads Stats

Details

System Requirements
biocViews	OneChannel , TwoChannel , DifferentialExpression , Visualization
Depends	Biobase , methods
Imports
Suggests	colonCA
License	Artistic
URL
Depends On Me
Imports Me
Suggests Me
Development History	Bioconductor Changelog