Meloidogyne javanica
BioProject PRJNA340324 | Data Source University of Hull | Taxonomy ID 6303
About Meloidogyne javanica
Meloidogyne javanica is a root-knot nematode and a major agricultural pest. It is found in tropical regions.
There is 1 alternative genome project for Meloidogyne javanica available in WormBase ParaSite: PRJEB8714
Genome Assembly & Annotation
Assembly
The assembly was produced using Illumina reads, as described in Szitenberg et al. (2017)
Annotation
The annotation was produced using AUGUSTUS. WormBase obtained it from the authors' GitHub repository.
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Key Publications
- Szitenberg A, Salazar-Jaramillo L, Blok VC, Laetsch DR, Joseph S, Williamson VM, Blaxter ML, Lunt DH. Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change. Genome Biol Evol, 2017;9(10):2844-2861
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Assembly Statistics
Assembly ASM369362v1, GCA_003693625.1
Strain VW4
Database Version WBPS19
Genome Size 150,345,270
Data Source University of Hull
Annotation Version 2019-01-WormBase
Gene counts
Coding genes 24,679
Pseudogenes 944
Gene transcripts 25,623
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