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Pull requests: deeptools/deepTools

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Pull requests list

move legend to up and fix y-axis inward if using different ymax
#1078 opened Jun 30, 2021 by xubeisi Loading... updated Oct 7, 2025
Clarify GC bias preference in computeGCBias documentation
#1420 opened Oct 3, 2025 by yuw444 Loading... updated Oct 3, 2025
1 of 4 tasks
Fixed typo
#1414 opened Aug 5, 2025 by bounlu Loading... updated Aug 5, 2025
1 of 4 tasks
np.warnings is deprecated
#1412 opened Jul 16, 2025 by vivekbhr Loading... updated Jul 16, 2025
1 of 4 tasks
[Docs] Adding diagram visualization for deepTools
#1408 opened Jul 4, 2025 by ivanmilevtues Loading... updated Jul 4, 2025
1 of 4 tasks
Fixed erroneous args.args in silhouette option of plotHeatmap.py
#1394 opened Apr 15, 2025 by meekrob Loading... updated Apr 15, 2025
3 tasks
added support for warnings stdlib
#1393 opened Apr 14, 2025 by AdriTara Loading... updated Apr 14, 2025
1 of 4 tasks
v4 and Galaxy-specific documentation updates
#1390 opened Mar 28, 2025 by wm75 • Draft updated Mar 28, 2025
[WIP] fixing planemo tests
#1375 opened Jan 24, 2025 by pavanvidem • Draft updated Jan 31, 2025
1 of 4 tasks
Added pytests for plotcorrelation tool
#1370 opened Jan 23, 2025 by SaimMomin12 Loading... updated Jan 24, 2025
1 of 5 tasks
Add pytests for fingerprint plot
#1372 opened Jan 23, 2025 by SaimMomin12 Loading... updated Jan 24, 2025
1 of 5 tasks
add plotPCA test
#1374 opened Jan 23, 2025 by pavanvidem Loading... updated Jan 23, 2025
Add pytests for plotProfiler
#1373 opened Jan 23, 2025 by SaimMomin12 Loading... updated Jan 23, 2025
1 of 5 tasks
Added some tests for the rust functions
#1369 opened Jan 22, 2025 by gerikson Loading... updated Jan 23, 2025
4 tasks
Add tests for plotEnrichment
#1371 opened Jan 23, 2025 by pavanvidem Loading... updated Jan 23, 2025
alignmentSieve: Adding the option to keep the original tags in the processed BAM
#1255 opened Sep 14, 2023 by samuelruizperez Loading... updated Sep 14, 2023
1 of 4 tasks
fix fully overlap reads
#1220 opened Jun 4, 2023 by y9c Loading... updated Jun 5, 2023
Adding independent ranges by sample option: for zMax zMin yMin and y...
#1116 opened Jan 20, 2022 by organic-chemistry Loading... updated Apr 4, 2023
3 tasks
Dev compute matrix strand 20220301
#1128 opened Mar 1, 2022 by joshtburdick Loading... updated Mar 1, 2022
1 of 4 tasks
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