ProteinModification (biojava 5.2.0 API)

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Package org.biojava.nbio.protmod

Interface ProteinModification

All Known Implementing Classes:

ProteinModificationImpl
```
public interface ProteinModification 
```
This interface defines information about a specific protein modification.

Since:

3.0

Author:

Jianjiong Gao

Method Summary

All Methods
Modifier and Type	Method	Description
`ModificationCategory`	`getCategory ()`
`ModificationCondition`	`getCondition ()`
`String`	`getDescription ()`
`String`	`getFormula ()`
`String`	`getId ()`
`Set<String>`	`getKeywords ()`
`ModificationOccurrenceType`	`getOccurrenceType ()`
`String`	`getPdbccId ()`
`String`	`getPdbccName ()`
`String`	`getPsimodId ()`
`String`	`getPsimodName ()`
`String`	`getResidId ()`
`String`	`getResidName ()`
`String`	`getSystematicName ()`

- Method Detail
  - getId
```
String getId()
```
    Returns:
    
    modification id.
  - getPdbccId
```
String getPdbccId()
```
    Returns:
    
    Protein Data Bank Chemical Component ID.
  - getPdbccName
```
String getPdbccName()
```
    Returns:
    
    Protein Data Bank Chemical Component name.
  - getResidId
```
String getResidId()
```
    Returns:
    
    RESID ID.
  - getResidName
```
String getResidName()
```
    Returns:
    
    RESID name.
  - getPsimodId
```
String getPsimodId()
```
    Returns:
    
    PSI-MOD ID.
  - getPsimodName
```
String getPsimodName()
```
    Returns:
    
    PSI-MOD name.
  - getSystematicName
```
String getSystematicName()
```
    Returns:
    
    Systematic name.
  - getDescription
```
String getDescription()
```
    Returns:
    
    Description.
  - getKeywords
```
Set<String> getKeywords()
```
    Returns:
    
    a set of keywords.
  - getCondition
```
ModificationCondition getCondition()
```
    Returns:
    
    ModificationCondition
  - getFormula
```
String getFormula()
```
    Returns:
    
    formula of the modified residue.
  - getCategory
```
ModificationCategory getCategory()
```
    Returns:
    
    the modification category.
  - getOccurrenceType
```
ModificationOccurrenceType getOccurrenceType()
```
    Returns:
    
    the modification occurrence type.