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. 2021 Sep 20;15(9):e0009795.
doi: 10.1371/journal.pntd.0009795. eCollection 2021 Sep.

Variants of MIRNA146A rs2910164 and MIRNA499 rs3746444 are associated with the development of cutaneous leishmaniasis caused by Leishmania guyanensis and with plasma chemokine IL-8

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Variants of MIRNA146A rs2910164 and MIRNA499 rs3746444 are associated with the development of cutaneous leishmaniasis caused by Leishmania guyanensis and with plasma chemokine IL-8

Tirza Gabrielle Ramos de Mesquita et al. PLoS Negl Trop Dis. .

Abstract

Leishmania are intracellular protozoan parasites that cause a wide spectrum of clinical manifestations in genetically susceptible individuals with an insufficient or balanced Th1 immune response to eliminate the parasite. MiRNAs play important regulatory role in numerous biological processes including essential cellular functions. miR146-a acts as an inhibitor of interleukin 1 receptor associated kinase 1 (IRAK1) and tumour necrosis factor (TNF) receptor associated factor 6 (TRAF6) present in the toll-like receptors pathway while miR499a modulates TGF-β and TNF signalling pathways. Here, we investigated whether MIRNA146A rs2910164 and MIRNA499 rs3746444 variants are associated with the development of L. guyanensis (Lg)-cutaneous leishmaniasis (CL). The variants MIR146A rs2910164 and MIR499A rs3746444 were assessed in 850 patients with Lg-CL and 891 healthy controls by polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP). Plasma cytokines were measured using the BioPlex assay. Carriers of rs2910164 CC genotype have 30% higher odds of developing CL (ORadjage/sex = 1.3 [95%CI 0.9-1.8]; Padjage/sex 0.14) compared to individuals with the genotype GG (ORadjage/sex = 0.77 [95%CI 0.56-1.0]; Padjage/sex 0.14) if exposed to Lg-infection. Heterozygous GC individuals also showed lower odds of developing CL (ORadjage/sex = 0.77 [95%CI 0.5-1.1]; Padjage/sex 0.09). Homozygosity for the allele C is suggestive of an association with the development of Lg-CL among exposed individuals to Lg-infection. However, the odds of developing CL associated with the CC genotype was evident only in male individuals (ORadjage = 1.3 [95% CI = 0.9-2.0]; Padjage = 0.06). Individuals homozygous for the G allele tend to have higher plasma IL-8 and CCL5. Similarly, for the MIR499A rs3746444, an association with the G allele was only observed among male individuals (OR = 1.4 [1.0-1.9]; P = 0.009). In a dominant model, individuals with the G allele (GG-GA) when compared to the AA genotype reveals that carriers of the G allele have 40% elevated odds of developing Lg-CL (ORadjage = 1.4 [1.1-1.9]). Individuals with the GG genotype have higher odds of developing Lg-CL (ORadjage/sex = 2.0 [95%CI 0.83-5.0]; Padjage = 0.01. Individuals homozygous for the G allele have higher plasma IL-8. Genetic combinations of both variants revealed that male individuals exposed to Lg bearing three or four susceptible alleles have higher odds of developing Lg-CL (OR = 2.3 [95% CI 1.0-4.7]; p = 0.017). Both MIR146A rs2910164 and MIR499A rs3746444 are associated with the development of Lg-CL and this association is prevalent in male individuals.

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Conflict of interest statement

The authors have declared that no competing interests exist.

Figures

Fig 1
Fig 1. MIRNA146A rs2910164 effects on IL-8 plasma levels in healthy controls.
Concentrations of plasma circulating IL-8 were compared between bearers of the AA, AG, and GG genotypes using inheritance models (codominant, dominant, recessive and overdominant). The mean concentrations are displayed in picogram per millilitre (pg/mL) with standard error (SE) of mean. The means are represented by black bars, whereas SE are represented by error bars. *Corrected for Benjamini-Hochberg False Discovery Rate assuming four tests. p < 0.05 is statistically significant.
Fig 2
Fig 2. MIRNA499A rs3746444 effects on IL-8 plasma levels in healthy controls.
Concentrations of plasma circulating IL-8 were compared between bearers of the AA, AG, and GG genotypes using inheritance models (codominant, dominant, recessive and overdominant). The mean concentrations are displayed in picogram by millilitre (pg/mL) with standard error (SE) of mean. The means are represented by black bars, whereas SE are represented by error bars. *Corrected for Benjamini-Hochberg False Discovery Rate assuming four tests. p < 0.05 is statistically significant.
Fig 3
Fig 3. MIRNA499A rs3746444 effects on IL-6, IL-8, and IL-17 plasma levels between AA homozygous versus GG homozygous in healthy controls.
Comparisons of circulating plasma levels of IL-6, IL-8 and IL-17 between the individuals AA and GG homozygous. The mean concentrations are displayed in picogram per millilitre (pg/mL) with standard error (SE) of mean. The means are represented by black bars, whereas SE are represented by error bars. *Corrected for Benjamini-Hochberg False Discovery Rate assuming three tests. p < 0.05 is statistically significant.

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