This site needs JavaScript to work properly. Please enable it to take advantage of the complete set of features!
Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

NIH NLM Logo
Log in
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2007 Oct;16(10):2272-7.
doi: 10.1110/ps.073068407.

Crystal structure of activin receptor type IIB kinase domain from human at 2.0 Angstrom resolution

Affiliations

Crystal structure of activin receptor type IIB kinase domain from human at 2.0 Angstrom resolution

Seungil Han et al. Protein Sci. 2007 Oct.

Abstract

Activin receptor type IIB (ActRIIB), a type II TGF-beta serine/threonine kinase receptor, is integral to the activin and myostatin signaling pathway. Ligands such as activin and myostatin bind to activin type II receptors (ActRIIA, ActRIIB), and the GS domains of type I receptors are phosphorylated by type II receptors. Myostatin, a negative regulator of skeletal muscle growth, is regarded as a potential therapeutic target and binds to ActRIIB effectively, and to a lesser extent, to ActRIIA. The high-resolution structure of human ActRIIB kinase domain in complex with adenine establishes the conserved bilobal architecture consistent with all other catalytic kinase domains. The crystal structure reveals that the adenine has a considerably different orientation from that of the adenine moiety of ATP observed in other kinase structures due to the lack of an interaction by ribose-phosphate moiety and the presence of tautomers with two different protonation states at the N9 nitrogen. Although the Lys217-Glu230 salt bridge is absent, the unphosphorylated activation loop of ActRIIB adopts a conformation similar to that of the fully active form. Unlike the type I TGF-beta receptor, where a partially conserved Ser280 is a gatekeeper residue, the AcRIIB structure possesses Thr265 with a back pocket supported by Phe247. Taken together, these structural features provide a molecular basis for understanding the coupled activity and recognition specificity for human ActRIIB kinase domain and for the rational design of selective inhibitors.

PubMed Disclaimer

Figures

Figure 1.
Figure 1.
Three-dimensional structure of ActRIIB-adenine complex from human. (A) Stereoview of the ActRIIB–adenine complex. Secondary structure elements are shown in cyan (α-helices), orange (β-strands), and gray (loops). The bound adenine is shown as spheres. (B) Active site of ActRIIB bound to adenine. The Fo-Fc omit map contoured at 3.0 σ (magenta) is shown for the adenine. The hydrogen bonds are indicated by broken lines. DFG motif is shown in pink, and residues involved in lipophilic pocket are shown in yellow.
Figure 2.
Figure 2.
A structure-based sequence alignment of the ActRIIB with other type I and type II receptor kinase domains (ActRIIA, ActRIB, TßRI, and TßRII). Secondary structure elements of the ActRIIB are represented by "noodles" (α-helices) and "arrows" (β-strands). They are colored blue for helices and orange for strands. Identical residues are highlighted in magenta. The DFG motif is boxed in red. The conserved residues involved in forming the back pocket are shown as "•" below the sequences. The gatekeeper residue is shown as "*" below sequences.

References

    1. Attisano L., Wrana, J.L., Montalvo, E., and Massagué, J. 1996. Activation of signaling by the activin receptor complex. Mol. Cell. Biol. 16: 1066–1073. - PMC - PubMed
    1. DeLano W.L. 2002. The PyMOL molecular graphics system, DeLano Scientific, San Carlos, CA, http://www.pymol.org.
    1. Donaldson C.J., Mathews, L.S., and Vale, W.W. 1992. Molecular cloning and binding properties of the human type II activin receptor. Biochem. Biophys. Res. Commun. 184: 310–316. - PubMed
    1. Graham H. and Peng, C. 2006. Activin receptor-like kinases: Structure, function and clinical implications. Endocr. Metab. Immune Disord. Drug Targets 6: 45–58. - PubMed
    1. Greenwald J., Vega, M.E., Allendorph, G.P., Fischer, W., and Choe, S. 2004. A flexible activin explains the membrane-dependent cooperative assembly of TGF-β family receptors. Mol. Cell 15: 485–489. - PubMed

Associated data

LinkOut - more resources

Cite

AltStyle によって変換されたページ (->オリジナル) /