Center for Environmental Biology and Ecosystem Studies - Research Result (Publication) FY 2020

FY 2020

Original Paper
A New Dinoflagellate Genome Illuminates a Conserved Gene Cluster Involved in Sunscreen Biosynthesis

Presenter : , , , , , , KAWACHI Masanobu,
Title : Genome Biology and Evolution, 13(2):1-7 (2020)
Original Paper
A New Dinoflagellate Genome Illuminates a Conserved Gene Cluster Involved in Sunscreen Biosynthesis

Presenter : , , , , , , KAWACHI Masanobu,
Title : Genome Biology and Evolution, 13(2):1-7 (2020)
Original Paper
New Distributional Records of Three Species of Euphylliidae (Cnidaria, Anthozoa, Hexacorallia, Scleractinia) from the Ryukyu Islands, Japan

Presenter : , ,
Title : Species Diversity, 25(2):275-282 (2020)
Original Paper
New Distributional Records of Three Species of Euphylliidae (Cnidaria, Anthozoa, Hexacorallia, Scleractinia) from the Ryukyu Islands, Japan

Presenter : , ,
Title : Species Diversity, 25(2):275-282 (2020)
Quantitative records of habitat-forming seaweedsfound in Japanese temperate and subtropical zones(fucoids and kelps)

Presenter : , , YAMANO Hiroya, YABE Tohru, KUMAGAI Naoki
Title : Ecological Research, 35:967-974 (2020)
Quantitative records of habitat-forming seaweedsfound in Japanese temperate and subtropical zones(fucoids and kelps)

Presenter : , , YAMANO Hiroya, YABE Tohru, KUMAGAI Naoki
Title : Ecological Research, 35:967-974 (2020)
Quantitative records of habitat-forming seaweedsfound in Japanese temperate and subtropical zones(fucoids and kelps)

Presenter : , , YAMANO Hiroya, YABE Tohru, KUMAGAI Naoki
Title : Ecological Research, 35:967-974 (2020)
Original Paper
Occurrence of spilled genetically modified oilseed rape growing along a Japanese roadside over 10 years

Presenter : NAKAJIMA Nobuyoshi, , , TAMAOKI Masanori,
Title : Weed Biology and Management , 20(4):139-146 (2020)
Original Paper
Occurrence of spilled genetically modified oilseed rape growing along a Japanese roadside over 10 years

Presenter : NAKAJIMA Nobuyoshi, , , TAMAOKI Masanori,
Title : Weed Biology and Management , 20(4):139-146 (2020)
Other Publications
Role of advection in atmospheric ammonia: A case study at a Japanese lake basin influenced by agricultural ammonia sources

Presenter : , , WATANABE Mirai, , , , , , , , , , SHINOHARA Ryuichiro, , , , ,
Title : Atmospheric Environment, 243: (2020)
Other Publications
Role of advection in atmospheric ammonia: A case study at a Japanese lake basin influenced by agricultural ammonia sources

Presenter : , , WATANABE Mirai, , , , , , , , , , SHINOHARA Ryuichiro, , , , ,
Title : Atmospheric Environment, 243: (2020)
Original Paper
Is harvest size a valid indirect measure of abundance for evaluating the population size of game animals using harvest-based estimation?

Presenter : FUKASAWA Keita, ,
Title : Wildlife Biology, 2020(4):wlb.00708 (2020)
Original Paper
Is harvest size a valid indirect measure of abundance for evaluating the population size of game animals using harvest-based estimation?

Presenter : FUKASAWA Keita, ,
Title : Wildlife Biology, 2020(4):wlb.00708 (2020)
Original Paper
Detection of Borrelia burgdorferi Sensu Lato and Relapsing Fever Borrelia in Feeding Ixodes Ticks and Rodents in Sarawak, Malaysia: New Geographical Records of Borrelia yangtzensis and Borrelia miyamotoi

Presenter : , , , , , ONUMA Manabu, ,
Title : pathogens, 9(846): (2020)
Original Paper
Invasive raccoon management systems and challenges in regions with active control

Presenter : ,
Title : BMC Ecology, 20(68): (2020)
Original Paper
Effects of herbivorous gastropod grazing on the sedimentation and succession of subtidal macroalgal assemblages

Presenter : , , , ,
Title : Marine Ecology Progress Series, 656:123-138 (2020)
Original Paper
Invasive raccoon management systems and challenges in regions with active control

Presenter : ,
Title : BMC Ecology, 20(68): (2020)
Original Paper
Draft genome sequence of the antimony-oxidizing Pseudomonas sp. strain SbOxS1, isolated from stibnite mine tailing soil

Presenter : , NAKAJIMA Nobuyoshi, YAMAMURA Shigeki
Title : Microbiology Resource Announcements, 9(49):e01218-20 (2020)
Original Paper
Draft genome sequence of Stenotrophomonas sp. strain SbOxS2, an antimony-oxidizing bacterium isolated from stibnite mine tailing soil

Presenter : , NAKAJIMA Nobuyoshi, YAMAMURA Shigeki
Title : Microbiology Resource Announcements, 9(49):e01219-20 (2020)
Original Paper
Fifteen New Species of Angiosperms from Bidoup-Nui Ba National Park, Southern Highlands of Vietnam

Presenter : , , , , , , , , , , ,
Title : Acta Phytotaxonomica et Geobotanica, 71(3):201-229 (2020)
Original Paper
Fifteen New Species of Angiosperms from Bidoup-Nui Ba National Park, Southern Highlands of Vietnam

Presenter : , , , , , , , , , , ,
Title : Acta Phytotaxonomica et Geobotanica, 71(3):201-229 (2020)
Original Paper
Distribution gradient of fucoid algae (Sargassaceae, Phaeophyta) along the coastline of Okinawa Island, southern Japan: relationship to environmental factors

Presenter : ABE Hiroya, , KUMAGAI Naoki, YAMANO Hiroya
Title : Regional Studies in Marine Science, 40(101526): (2020)
Original Paper
Evaluating the existence and benefit of major histocompatibility complex-based mate choice in an isolated owl population

Presenter : , ANDO Haruko,
Title : Journal of Evolutionary Biology, 33(6):762-772 (2020)
Original Paper
Evaluating the existence and benefit of major histocompatibility complex-based mate choice in an isolated owl population

Presenter : , ANDO Haruko,
Title : Journal of Evolutionary Biology, 33(6):762-772 (2020)
Original Paper
Methodological trends and perspectives of animal dietary studies by noninvasive fecal DNA metabarcoding

Presenter : ANDO Haruko, , , , ,
Title : Environmental DNA, 2(4):391-406 (2020)
Original Paper
DNA meta-barcoding revealed that sika deer foraging strategies vary with season in a forest with degraded understory vegetation

Presenter : , , ANDO Haruko, , ,
Title : Forest Ecology and Management (2020)
Original Paper
Methodological trends and perspectives of animal dietary studies by noninvasive fecal DNA metabarcoding

Presenter : ANDO Haruko, , , , ,
Title : Environmental DNA, 2(4):391-406 (2020)
Original Paper
DNA meta-barcoding revealed that sika deer foraging strategies vary with season in a forest with degraded understory vegetation

Presenter : , , ANDO Haruko, , ,
Title : Forest Ecology and Management (2020)
Original Paper
Novel method for measuring aquatic bacterial productivity using D10-leucine based on protein synthesis rate

Presenter : TSUCHIYA Kenji, , TOMIOKA Noriko, , , , , , , KOZU Ayato
Title : Aquatic Microbial Ecology, 85:121-129 (2020)
Original Paper
Novel method for measuring aquatic bacterial productivity using D10-leucine based on protein synthesis rate

Presenter : TSUCHIYA Kenji, , TOMIOKA Noriko, , , , , , , KOZU Ayato
Title : Aquatic Microbial Ecology, 85:121-129 (2020)
Original Paper
Long-term warming destabilizes aquatic ecosystems through weakening biodiversity‐mediated causal networks

Presenter : , , , , , , , , , , MATSUZAKI Shin-Ichiro, , , ,
Title : Global Change Biology, 26(11):6413-6423 (2020)
Original Paper
Long-term warming destabilizes aquatic ecosystems through weakening biodiversity‐mediated causal networks

Presenter : , , , , , , , , , , MATSUZAKI Shin-Ichiro, , , ,
Title : Global Change Biology, 26(11):6413-6423 (2020)
Original Paper
Data on coral species occurrences in Japan since 1929

Presenter : , , , , KUMAGAI Naoki, YAMANO Hiroya
Title : Ecological Research, 2020:1-11 (2020)
Original Paper
Landscape associations of farmland bird diversity in Germany and Japan

Presenter : , , KADOYA Taku, YOSHIOKA Akira,
Title : Global Ecology and Conservation, 21:e00891 (2020)
Original Paper
Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, ,
Title : PLOS ONE, 15(10):e0231127 (2020)
Evaluation of biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, , ,
Title : bioRxiv, 1-31 (2020)
Original Paper
Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, ,
Title : PLOS ONE, 15(10):e0231127 (2020)
Evaluation of biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, , ,
Title : bioRxiv, 1-31 (2020)
Original Paper
Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, ,
Title : PLOS ONE, 15(10):e0231127 (2020)
Evaluation of biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, , ,
Title : bioRxiv, 1-31 (2020)
Original Paper
Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, ,
Title : PLOS ONE, 15(10):e0231127 (2020)
Evaluation of biodiversity in estuaries using environmental DNA metabarcoding

Presenter : , , , , KAMEYAMA Satoshi, , ,
Title : bioRxiv, 1-31 (2020)
Original Paper
A new preferentially outcrossing monoicous species of Volvox sect. Volvox (Chlorophyta) from Thailand

Presenter : , , , , KAWACHI Masanobu
Title : PloS one, 15(7): (2020)
Original Paper
A new preferentially outcrossing monoicous species of Volvox sect. Volvox (Chlorophyta) from Thailand

Presenter : , , , , KAWACHI Masanobu
Title : PloS one, 15(7): (2020)
Original Paper
Characterization of eight polymorphic microsatellite DNA markers and mitochondrial cytochrome c oxidase subunit II gene in Bali myna Leucopsar rothschildi

Presenter : , , ONUMA Manabu
Title : International Zoo Yearbook (2020)
Original Paper
Japanese golden eagle conservation science: current status and future needs

Presenter : , , , , , , , , ONUMA Manabu, , , , ,
Title : Japanese Journal of Zoo and Wildlife Medicine, 25(1):9-28 (2020)
Other Publications
The mitochondrial genome and phylogenetic position of a marine snail Nerita (Heminerita) japonica (Gastropoda: Neritimorpha: Neritidae)

Presenter : , , NAKAJIMA Nobuyoshi,
Title : Mitochondrial DNA Part B Resources (2020)
Original Paper
Genetic Diversity and Genetic Structure of the Wild Tsushima Leopard Cat from Genome-Wide Analysis

Presenter : , NAKAJIMA Nobuyoshi, ONUMA Manabu,
Title : Animals, 10(8):1375 (2020)
Other Publications
The mitochondrial genome and phylogenetic position of a marine snail Nerita (Heminerita) japonica (Gastropoda: Neritimorpha: Neritidae)

Presenter : , , NAKAJIMA Nobuyoshi,
Title : Mitochondrial DNA Part B Resources (2020)
Original Paper
Characterization of eight polymorphic microsatellite DNA markers and mitochondrial cytochrome c oxidase subunit II gene in Bali myna Leucopsar rothschildi

Presenter : , , ONUMA Manabu
Title : International Zoo Yearbook (2020)
Original Paper
Japanese golden eagle conservation science: current status and future needs

Presenter : , , , , , , , , ONUMA Manabu, , , , ,
Title : Japanese Journal of Zoo and Wildlife Medicine, 25(1):9-28 (2020)
Original Paper
Genetic Diversity and Genetic Structure of the Wild Tsushima Leopard Cat from Genome-Wide Analysis

Presenter : , NAKAJIMA Nobuyoshi, ONUMA Manabu,
Title : Animals, 10(8):1375 (2020)
Original Paper
Current situation regarding lead exposure in birds in Japan (2015-2018); lead exposure is still occurring

Presenter : , , , , , , , , ONUMA Manabu, ,
Title : Journal of Veterinary Medical Science, 82(8):1118-1123 (2020)
Original Paper
Characterization of eight polymorphic microsatellite DNA markers and mitochondrial cytochrome c oxidase subunit II gene in Bali myna Leucopsar rothschildi

Presenter : , , ONUMA Manabu
Title : International Zoo Yearbook (2020)
Original Paper
Japanese golden eagle conservation science: current status and future needs

Presenter : , , , , , , , , ONUMA Manabu, , , , ,
Title : Japanese Journal of Zoo and Wildlife Medicine, 25(1):9-28 (2020)
Original Paper
Genetic Diversity and Genetic Structure of the Wild Tsushima Leopard Cat from Genome-Wide Analysis

Presenter : , NAKAJIMA Nobuyoshi, ONUMA Manabu,
Title : Animals, 10(8):1375 (2020)
Original Paper
Current situation regarding lead exposure in birds in Japan (2015-2018); lead exposure is still occurring

Presenter : , , , , , , , , ONUMA Manabu, ,
Title : Journal of Veterinary Medical Science, 82(8):1118-1123 (2020)
Original Paper
Japanese golden eagle conservation science: current status and future needs

Presenter : , , , , , , , , ONUMA Manabu, , , , ,
Title : Japanese Journal of Zoo and Wildlife Medicine, 25(1):9-28 (2020)
Original Paper
Genetic Diversity and Genetic Structure of the Wild Tsushima Leopard Cat from Genome-Wide Analysis

Presenter : , NAKAJIMA Nobuyoshi, ONUMA Manabu,
Title : Animals, 10(8):1375 (2020)
Original Paper
A DNA mini-barcoding system for endangered unionid mussels in the Lake Biwa system in Japan

Presenter : MABUCHI Koji,
Title : Conservation Genetics Resources, 12(4):581-584 (2020)
Original Paper
Variability of benthic methane-derived carbon along seasonal, biological, and sedimentary gradients in a polymictic lake

Presenter : TSUCHIYA Kenji, , SHINOHARA Ryuichiro, , MATSUZAKI Shin-Ichiro, UENO Ryuhei, , KOZU Ayato
Title : Limnology and Oceanography (2020)
Original Paper
Sexual reproduction of the snow alga Chloromonas fukushimae (Volvocales, Chlorophyceae) induced using cultured materials

Presenter : , KAWACHI Masanobu, , ,
Title : PLoS One, 15(8): (2020)
Original Paper
Variability of benthic methane-derived carbon along seasonal, biological, and sedimentary gradients in a polymictic lake

Presenter : TSUCHIYA Kenji, , SHINOHARA Ryuichiro, , MATSUZAKI Shin-Ichiro, UENO Ryuhei, , KOZU Ayato
Title : Limnology and Oceanography (2020)
Original Paper
Sexual reproduction of the snow alga Chloromonas fukushimae (Volvocales, Chlorophyceae) induced using cultured materials

Presenter : , KAWACHI Masanobu, , ,
Title : PLoS One, 15(8): (2020)
Original Paper
Theoretical analysis of temperature‐dependent model of respiratory O2 consumption using the kinetics of the cytochrome and alternative pathways

Presenter : INOUE Tomomi,
Title : New Phytologist (2020)
Original Paper
Theoretical analysis of temperature‐dependent model of respiratory O2 consumption using the kinetics of the cytochrome and alternative pathways

Presenter : INOUE Tomomi,
Title : New Phytologist (2020)
Original Paper
Development of a camera trap for perching dragonflies: a new tool for freshwater environmental assessment

Presenter : YOSHIOKA Akira, , OGUMA Hiroyuki, , FUKASAWA Keita, , KADOYA Taku
Title : PeerJ, 8:e9681 (2020)
Original Paper
Theoretical analysis of temperature‐dependent model of respiratory O2 consumption using the kinetics of the cytochrome and alternative pathways

Presenter : INOUE Tomomi,
Title : New Phytologist (2020)
Original Paper
Acoustic monitoring data of anuran species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident

Presenter : YOSHIOKA Akira, , , , , , FUKASAWA Keita
Title : Ecological Research, 35:765-772 (2020)
Original Paper
Albinism and inbreeding depression in seedlings of the tropical tree, Shorea laxa

Presenter : TAKEUCHI Yayoi, ,
Title : Journal of Forest Research (2020)
Original Paper
Albinism and inbreeding depression in seedlings of the tropical tree, Shorea laxa

Presenter : TAKEUCHI Yayoi, ,
Title : Journal of Forest Research (2020)
Original Paper
Albinism and inbreeding depression in seedlings of the tropical tree, Shorea laxa

Presenter : TAKEUCHI Yayoi, ,
Title : Journal of Forest Research (2020)
Original Paper
Mangrove development and carbon storage on an isolated coral atoll

Presenter : YAMANO Hiroya, INOUE Tomomi,
Title : Environmental Research Communications, 2(065002): (2020)
Original Paper
Coral-spawn slicks: Reflectance spectra and detection using optical satellite data

Presenter : YAMANO Hiroya, ,
Title : Remote Sensing of Environment, 251(112058): (2020)
Original Paper
Satellite constellation reveals crop growth patterns and improves mapping accuracy of cropping practices for subtropical small-scale fields in Japan

Presenter : , YAMANO Hiroya
Title : Remote Sensing, 12(2419): (2020)
Original Paper
Satellite constellation reveals crop growth patterns and improves mapping accuracy of cropping practices for subtropical small-scale fields in Japan

Presenter : , YAMANO Hiroya
Title : Remote Sensing, 12(2419): (2020)
Original Paper
Genetic diversity of invasive Spartina alterniflora Loisel. (Poaceae) introduced unintentionally into Japan and its invasion pathway

Presenter : , TAMAOKI Masanori, , , , ,
Title : Frontier in Plant Science, 11:556039 (2020)
Original Paper
Genetic diversity of invasive Spartina alterniflora Loisel. (Poaceae) introduced unintentionally into Japan and its invasion pathway

Presenter : , TAMAOKI Masanori, , , , ,
Title : Frontier in Plant Science, 11:556039 (2020)
Original Paper
Reconstruction method and optimum range of camera-shooting angle for 3D plant modeling using a multi-camera photography system

Presenter : , , , , , , , ,
Title : Plnat Methods, 16:118 (2020)
Original Paper
Long-term monitoring reveals among-year consistency in the ecological impacts of insecticides on animal communities in paddies

Presenter : , , , GOKA Kouichi, HAYASHI Takehiko
Title : Ecological Indicators, 113(106227): (2020)
Original Paper
Estimating fish population abundance by integrating quantitative data on environmental DNA and hydrodynamic modelling

Presenter : FUKAYA Keiichi, , , , , , , , , ,
Title : Molecular Ecology (2020)
Original Paper
Tourist intentions to donate to non-lethal feral cat management at a potential natural World Heritage site in Japan

Presenter : , KUBO Takahiro
Title : Human Dimensions of Wildlife (2020)
Other Publications
Freshwater and Brackish-water Macroinvertebrates in the Ogasawara Islands

Presenter : , UENO Ryuhei,
Title : Global Environmental Rearch, 23:73-75 (2020)
Original Paper
Habitat characteristics and size structure in a population of an endangered lamprey, Lethenteron sp. N, in an urbanized area of Japan

Presenter : HIRANO Yuna, , KONDO Natsuko, NISHIHIRO Jun
Title : Icthyological Research (2020)
Original Paper
Understanding residents’ perceptions of nature and local economic activities using an open-ended question before protected area designation in Amami Islands, Japan

Presenter : , KUBO Takahiro,
Title : Journal for Nature Conservation, 56:125857 (2020)
Original Paper
Understanding residents’ perceptions of nature and local economic activities using an open-ended question before protected area designation in Amami Islands, Japan

Presenter : , KUBO Takahiro,
Title : Journal for Nature Conservation, 56:125857 (2020)
Original Paper
Predicting Changes in Ecosystems after Eradication of Invasive Species through Computer Simulations

Presenter : YOSHIDA Katsuhiko
Title : Global Environmental Research, 23:45-51 (2020)
Original Paper
The Genetic Basis of Morphological Diversity in Domesticated Goldfish

Presenter : , , , , , , , , MATSUZAKI Shin-Ichiro, , , , , , ,
Title : Current Biology, 30(12):2260-2274 (2020)
Original Paper
Trophic control changes with season and nutrient loading in lakes

Presenter : , , , , , MATSUZAKI Shin-Ichiro,
Title : Ecology Letters, 23:1287-1297 (2020)
Original Paper
Trophic control changes with season and nutrient loading in lakes

Presenter : , , , , , MATSUZAKI Shin-Ichiro,
Title : Ecology Letters, 23:1287-1297 (2020)
Original Paper
Primary and Immortalized Cell Lines Derived From the Amami Rabbit (Pentalagus Furnessi) and Evolutionally Conserved Cell Cycle Control With CDK4 and Cyclin D1

Presenter : , KATAYAMA Masafumi, , , , , , ONUMA Manabu, ,
Title : Biochemical and Biophysical Research Communications, 525(4):1046-1053 (2020)
Original Paper
Primary and Immortalized Cell Lines Derived From the Amami Rabbit (Pentalagus Furnessi) and Evolutionally Conserved Cell Cycle Control With CDK4 and Cyclin D1

Presenter : , KATAYAMA Masafumi, , , , , , ONUMA Manabu, ,
Title : Biochemical and Biophysical Research Communications, 525(4):1046-1053 (2020)
Original Paper
Draft genome sequence of Geobacter sp. strain SVR, isolated from antimony mine soil

Presenter : , , NAKAJIMA Nobuyoshi, YAMAMURA Shigeki, , ,
Title : Microbiology Resource Announcements, 9(26):e00461-20 (2020)
Original Paper
Effects of downwash during unmanned aircraft system-assisted water sampling on water mass structure directly below the UAS

Presenter : , KOZU Ayato
Title : Limnology and Oceanography: Methods (2020)
Original Paper
Effects of downwash during unmanned aircraft system-assisted water sampling on water mass structure directly below the UAS

Presenter : , KOZU Ayato
Title : Limnology and Oceanography: Methods (2020)
Original Paper
Range expansion of the tracheal mite Acarapis woodi (Acari: Tarsonemidae) among Japanese honey bee, Apis cerana japonica, in Japan

Presenter : , SAKAMOTO Yoshiko
Title : Experimental and Applied Acarology (2020)
Original Paper
Range expansion of the tracheal mite Acarapis woodi (Acari: Tarsonemidae) among Japanese honey bee, Apis cerana japonica, in Japan

Presenter : , SAKAMOTO Yoshiko
Title : Experimental and Applied Acarology (2020)

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