Taxonomy browser Taxonomy Browser (Limnospira platensis NIES-39)

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Entrez records

Database name Direct links Subtree links Links from type

BioProject 3 3 -

BioSample 2 2 -

Gene 13,303 13,303 -

Identical Protein Groups 8,010 8,010 -

Nucleotide 20 20 -

Protein 18,776 18,776 -

SRA 1 1 -

Taxonomy 1 1 -

Limnospira platensis NIES-39

Taxonomy ID: 696747 (for references in articles please use NCBI:txid696747)

current name

Limnospira platensis NIES-39

equivalent:

Arthrospira platensis IAM M-135 , co-identical strain¹⁾

equivalent:

Spirulina platensis IAM M-135

Arthrospira platensis IAM M-222 , co-identical strain²⁾

equivalent:

Spirulina platensis IAM M-222

Spirulina platensis NIES-39

NCBI BLAST name: cyanobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage(full): cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Sirenicapillariaceae; Limnospira; Limnospira platensis

Notes:

1) Co-identical strain: these strains are derived from the same original isolate
2) Co-identical strain: these strains are derived from the same original isolate

Comments and References:

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Fujisawa T et al. (2010)

Fujisawa, T., Narikawa, R., Okamoto, S., Ehira, S., Yoshimura, H., Suzuki, I., Masuda, T., Mochimaru, M., Takaichi, S., Awai, K., Sekine, M., Horikawa, H., Yashiro, I., Omata, S., Takarada, H., Katano, Y., Kosugi, H., Tanikawa, S., Ohmori, K., Sato, N., Ikeuchi, M., Fujita, N., and Ohmori, M. "Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39." DNA Res. (2010) 17:85-103.

Shiraishi H & Nishida H (2023)

Shiraishi, H., and Nishida, H. "Complete genome sequence of the edible filamentous cyanobacterium Arthrospira platensis NIES-39, based on long-read sequencing." Microbiol. Resour. Announc. (2023) 12(1):e01139-22.

Watanabe MM & Ichimura T (1977)

Watanabe, M.M., and Ichimura, T. "Fresh- and salt-water forms of Spirulina platensis in axenic culture." Jpn. J. Phycol. (1977) 25:371-377. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider

Arthrospira platensis NIES-39 organism-specific BioCyc

GOLD: Go0006880 organism-specific Genomes On Line Database

650377906: Arthrospira platensis NIES-39 organism-specific Integrated Microbial Genomes

OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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