ReactomeGSA.data

This is the released version of ReactomeGSA.data; for the devel version, see ReactomeGSA.data.

Companion data package for the ReactomeGSA package

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DOI: 10.18129/B9.bioc.ReactomeGSA.data

Bioconductor version: Release (3.22)

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

Author: Johannes Griss [aut, cre] ORCID iD ORCID: 0000-0003-2206-9511

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("ReactomeGSA.data")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ReactomeGSA.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExpressionData, Homo_sapiens_Data, Proteome, RNASeqData

Version 1.24.0

License Artistic-2.0

Depends R (>= 3.6), limma, edgeR, ReactomeGSA, Seurat

Imports

System Requirements

URL https://github.com/reactome/ReactomeGSA.data/issues

Bug Reports https://github.com/reactome/ReactomeGSA.data

Suggests

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me ReactomeGSA

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ReactomeGSA.data_1.24.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/ReactomeGSA.data

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ReactomeGSA.data

Package Short Url https://bioconductor.org/packages/ReactomeGSA.data/

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