ChIPDBData

This is the released version of ChIPDBData; for the devel version, see ChIPDBData.

ChIP-seq Target Databases for TFEA.ChIP

Bioconductor version: Release (3.22)

Provides curated gene target databases derived from ChIP-seq datasets, formatted as ChIPDB objects for use with TFEA.ChIP.

Author: Yosra Berrouayel [aut, cre] ORCID iD ORCID: 0000-0002-0768-5933 , Luis del Peso [aut] ORCID iD ORCID: 0000-0003-4014-5688

Maintainer: Yosra Berrouayel <yosraberrouayel at gmail.com>

Citation (from within R, enter citation("ChIPDBData")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ChIPDBData")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChIPDBData")

Using ChIPDBData HTML R Script

Reference Manual PDF

NEWS Text

Version 1.0.0

License GPL-3

Depends

Imports ExperimentHub

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)

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Source Repository git clone https://git.bioconductor.org/packages/ChIPDBData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChIPDBData

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