shinyMethyl

This is the released version of shinyMethyl; for the devel version, see shinyMethyl.

Interactive visualization for Illumina methylation arrays

Bioconductor version: Release (3.22)

Interactive tool for visualizing Illumina methylation array data. Both the 450k and EPIC array are supported.

Author: Jean-Philippe Fortin [cre, aut], Kasper Daniel Hansen [aut]

Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>

Citation (from within R, enter citation("shinyMethyl")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("shinyMethyl")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("shinyMethyl")

shinyMethyl: interactive visualization of Illumina 450K methylation arrays HTML R Script

Reference Manual PDF

NEWS Text

Version 1.46.0

In Bioconductor since BioC 3.0 (R-3.1) (11 years)

License Artistic-2.0

Depends

Imports Biobase, BiocGenerics, graphics, grDevices, htmltools, MatrixGenerics, methods, minfi, RColorBrewer, shiny, stats, utils

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) shinyMethyl_1.45.0.zip

macOS Binary (x86_64) shinyMethyl_1.46.0.tgz

macOS Binary (arm64) shinyMethyl_1.46.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/shinyMethyl

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/shinyMethyl

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