optimalFlow

This is the released version of optimalFlow; for the devel version, see optimalFlow.

Bioconductor version: Release (3.22)

Optimal-transport techniques applied to supervised flow cytometry gating.

Author: Hristo Inouzhe <hristo.inouzhe at gmail.com>

Maintainer: Hristo Inouzhe <hristo.inouzhe at gmail.com>

Citation (from within R, enter citation("optimalFlow")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("optimalFlow")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("optimalFlow")

optimalFlow: optimal-transport approach to Flow Cytometry analysis HTML R Script

Reference Manual PDF

Version 1.22.0

In Bioconductor since BioC 3.11 (R-4.0) (5.5 years)

License Artistic-2.0

Depends dplyr, optimalFlowData, rlang (>= 0.4.0)

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) optimalFlow_1.21.0.zip

macOS Binary (x86_64) optimalFlow_1.22.0.tgz

macOS Binary (arm64) optimalFlow_1.22.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/optimalFlow

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/optimalFlow

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