methylCC

This is the released version of methylCC; for the devel version, see methylCC.

Estimate the cell composition of whole blood in DNA methylation samples

Bioconductor version: Release (3.22)

A tool to estimate the cell composition of DNA methylation whole blood sample measured on any platform technology (microarray and sequencing).

Author: Stephanie C. Hicks [aut, cre] ORCID iD ORCID: 0000-0002-7858-0231 , Rafael Irizarry [aut] ORCID iD ORCID: 0000-0002-3944-4309

Maintainer: Stephanie C. Hicks <shicks19 at jhu.edu>

Citation (from within R, enter citation("methylCC")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("methylCC")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("methylCC")

The methylCC user's guide HTML R Script

Reference Manual PDF

NEWS Text

Version 1.24.0

In Bioconductor since BioC 3.10 (R-3.6) (6 years)

License GPL-3

Depends R (>= 3.6), FlowSorted.Blood.450k

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Follow Installation instructions to use this package in your R session.

Source Package methylCC_1.24.0.tar.gz

Windows Binary (x86_64) methylCC_1.23.0.zip

macOS Binary (x86_64) methylCC_1.24.0.tgz

macOS Binary (arm64) methylCC_1.24.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/methylCC

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/methylCC

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