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ggsc

This is the released version of ggsc; for the devel version, see ggsc.

Visualizing Single Cell and Spatial Transcriptomics


Bioconductor version: Release (3.22)

Useful functions to visualize single cell and spatial data. It supports visualizing 'Seurat', 'SingleCellExperiment' and 'SpatialExperiment' objects through grammar of graphics syntax implemented in 'ggplot2'.

Author: Guangchuang Yu [aut, cre, cph] ORCID iD ORCID: 0000-0002-6485-8781 , Shuangbin Xu [aut] ORCID iD ORCID: 0000-0003-3513-5362 , Noriaki Sato [ctb]

Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>

Citation (from within R, enter citation("ggsc")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ggsc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ggsc")
Visualizing single cell data HTML R Script
Reference Manual PDF
NEWS Text

Details

Version 1.8.0
In Bioconductor since BioC 3.18 (R-4.3) (2 years)
License Artistic-2.0
Depends R (>= 4.1.0)
System Requirements GNU make
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ggsc_1.8.0.tar.gz
Windows Binary (x86_64) ggsc_1.7.0.zip
macOS Binary (x86_64) ggsc_1.8.0.tgz
macOS Binary (arm64) ggsc_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ggsc
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ggsc
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