TFARM
This is the released version of TFARM; for the devel version, see TFARM.
Transcription Factors Association Rules Miner
Bioconductor version: Release (3.22)
It searches for relevant associations of transcription factors with a transcription factor target, in specific genomic regions. It also allows to evaluate the Importance Index distribution of transcription factors (and combinations of transcription factors) in association rules.
Author: Liuba Nausicaa Martino, Alice Parodi, Gaia Ceddia, Piercesare Secchi, Stefano Campaner, Marco Masseroli
Maintainer: Liuba Nausicaa Martino <liuban.martino at gmail.com>
citation("TFARM")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TFARM")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TFARM")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.