SNPediaR

This is the released version of SNPediaR; for the devel version, see SNPediaR.

Query data from SNPedia

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DOI: 10.18129/B9.bioc.SNPediaR

Bioconductor version: Release (3.22)

SNPediaR provides some tools for downloading and parsing data from the SNPedia web site . The implemented functions allow users to import the wiki text available in SNPedia pages and to extract the most relevant information out of them. If some information in the downloaded pages is not automatically processed by the library functions, users can easily implement their own parsers to access it in an efficient way.

Author: David Montaner [aut, cre]

Maintainer: David Montaner <david.montaner at gmail.com>

Citation (from within R, enter citation("SNPediaR")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("SNPediaR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SNPediaR")

SNPediaR HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews SNP, Software, VariantAnnotation

Version 1.36.0

In Bioconductor since BioC 3.4 (R-3.3) (9 years)

License GPL-2

Depends R (>= 3.0.0)

Imports RCurl, jsonlite

System Requirements

URL https://github.com/genometra/SNPediaR

Bug Reports https://github.com/genometra/SNPediaR/issues

Suggests BiocStyle, knitr, rmarkdown, testthat

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Depends On Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SNPediaR_1.36.0.tar.gz

Windows Binary (x86_64) SNPediaR_1.35.0.zip (64-bit only)

macOS Binary (x86_64) SNPediaR_1.36.0.tgz

macOS Binary (arm64) SNPediaR_1.36.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/SNPediaR

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SNPediaR

Bioc Package Browser https://code.bioconductor.org/browse/SNPediaR/

Package Short Url https://bioconductor.org/packages/SNPediaR/

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