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DEFormats
This is the released version of DEFormats; for the devel version, see DEFormats.
Differential gene expression data formats converter
Bioconductor version: Release (3.22)
Convert between different data formats used by differential gene expression analysis tools.
Author: Andrzej Oleś
Maintainer: Andrzej Oleś <andrzej.oles at gmail.com>
Citation (from within R, enter
citation("DEFormats")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DEFormats")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DEFormats")
Reference Manual
PDF
NEWS
Text
Details
biocViews
DifferentialExpression, GeneExpression, ImmunoOncology, RNASeq, Sequencing, Software, Transcription
Version
1.38.0
In Bioconductor since
BioC 3.3 (R-3.3) (9.5 years)
License
GPL-3
Depends
Imports
checkmate, data.table, DESeq2, edgeR(>= 3.13.4), GenomicRanges, methods, S4Vectors, stats, SummarizedExperiment
System Requirements
Bug Reports
https://github.com/aoles/DEFormats/issues
See More
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Build Report
Build Report
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package
DEFormats_1.38.0.tar.gz
Windows Binary (x86_64)
DEFormats_1.37.0.zip
macOS Binary (x86_64)
DEFormats_1.38.0.tgz
macOS Binary (arm64)
DEFormats_1.38.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/DEFormats
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/DEFormats
Bioc Package Browser
https://code.bioconductor.org/browse/DEFormats/
Package Short Url
https://bioconductor.org/packages/DEFormats/
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