nethet

This is the development version of nethet; for the stable release version, see nethet.

A bioconductor package for high-dimensional exploration of biological network heterogeneity

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DOI: 10.18129/B9.bioc.nethet

Bioconductor version: Development (3.23)

Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).

Author: Nicolas Staedler, Frank Dondelinger

Maintainer: Nicolas Staedler <staedler.n at gmail.com>, Frank Dondelinger <fdondelinger.work at gmail.com>

Citation (from within R, enter citation("nethet")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("nethet")

For older versions of R, please refer to the appropriate Bioconductor release.