|
24 | 24 |
|
25 | 25 | have_dcmstack = True |
26 | 26 | try: |
27 | | - import dicom |
| 27 | + import pydicom |
28 | 28 | import dcmstack |
29 | 29 | from dcmstack.dcmmeta import NiftiWrapper |
30 | 30 | except ImportError: |
|
34 | 34 | def sanitize_path_comp(path_comp): |
35 | 35 | result = [] |
36 | 36 | for char in path_comp: |
37 | | - if char not in string.letters + string.digits + "-_.": |
| 37 | + if char not in string.ascii_letters + string.digits + "-_.": |
38 | 38 | result.append("_") |
39 | 39 | else: |
40 | 40 | result.append(char) |
@@ -154,7 +154,7 @@ def _run_interface(self, runtime): |
154 | 154 | stack = dcmstack.DicomStack(meta_filter=meta_filter) |
155 | 155 | for src_path in src_paths: |
156 | 156 | if not imghdr.what(src_path) == "gif": |
157 | | - src_dcm = dicom.read_file(src_path, force=self.inputs.force_read) |
| 157 | + src_dcm = pydicom.dcmread(src_path, force=self.inputs.force_read) |
158 | 158 | stack.add_dcm(src_dcm) |
159 | 159 | nii = stack.to_nifti(embed_meta=True) |
160 | 160 | nw = NiftiWrapper(nii) |
|
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