Commit 967ef92

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Merge pull request #3028 from nipy/gpiantoni/2921-replacement

FIX: Qwarp in AFNI can have NIFTI and NIFTI_GZ as extensions

2 parents c69d4ad + d229372 commit 967ef92Copy full SHA for 967ef92

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Lines changed: 8 additions & 3 deletions

Original file line number	Diff line number	Diff line change
`@@ -3773,13 +3773,18 @@ def _list_outputs(self):`
`3773`	`3773`
`3774`	`3774`	`if not isdefined(self.inputs.out_file):`
`3775`	`3775`	`prefix = self._gen_fname(self.inputs.in_file, suffix='_QW')`
`3776`		`- ext = '.HEAD'`
`3777`		`- suffix = '+tlrc'`
	`3776`	`+ outputtype = self.inputs.outputtype`
	`3777`	`+ if outputtype == 'AFNI':`
	`3778`	`+ ext = '.HEAD'`
	`3779`	`+ suffix = '+tlrc'`
	`3780`	`+ else:`
	`3781`	`+ ext = Info.output_type_to_ext(outputtype)`
	`3782`	`+ suffix = ''`
`3778`	`3783`	`else:`
`3779`	`3784`	`prefix = self.inputs.out_file`
`3780`	`3785`	`ext_ind = max([`
`3781`	`3786`	`prefix.lower().rfind('.nii.gz'),`
`3782`		`- prefix.lower().rfind('.nii.')`
	`3787`	`+ prefix.lower().rfind('.nii')`
`3783`	`3788`	`])`
`3784`	`3789`	`if ext_ind == -1:`
`3785`	`3790`	`ext = '.HEAD'`

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