Analysis of RNA Crosslinking Data [R package rnaCrosslinkOO version 0.1.4]

Jonathan Price

rnaCrosslinkOO: Analysis of RNA Crosslinking Data

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Version: 0.1.4

Depends: seqinr, GenomicRanges, stats

Imports: ggplot2, reshape2, MASS, mixtools, utils, S4Vectors, patchwork, doParallel, igraph, R4RNA, RColorBrewer, IRanges, foreach, grDevices, heatmap3, TopDom, tidyverse, RRNA, ggrepel, methods, parallel, ClassDiscovery

Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)

Published: 2024年07月10日

DOI: 10.32614/CRAN.package.rnaCrosslinkOO

Author: Jonathan Price ORCID iD [aut, cre], Andrew Lim [ctb]

Maintainer: Jonathan Price <jlp76 at cam.ac.uk>

BugReports: https://github.com/JLP-BioInf/rnaCrosslinkOO/issues

License: GPL-3

NeedsCompilation: no

Citation: rnaCrosslinkOO citation info

Materials: README

CRAN checks: rnaCrosslinkOO results

Documentation:

Reference manual: rnaCrosslinkOO.html , rnaCrosslinkOO.pdf

Vignettes: rnaCrosslinksOO (source, R code)

Downloads:

Package source: rnaCrosslinkOO_0.1.4.tar.gz

Windows binaries: r-devel: rnaCrosslinkOO_0.1.4.zip, r-release: rnaCrosslinkOO_0.1.4.zip, r-oldrel: rnaCrosslinkOO_0.1.4.zip

macOS binaries: r-release (arm64): rnaCrosslinkOO_0.1.4.tgz, r-oldrel (arm64): rnaCrosslinkOO_0.1.4.tgz, r-release (x86_64): rnaCrosslinkOO_0.1.4.tgz, r-oldrel (x86_64): rnaCrosslinkOO_0.1.4.tgz

Old sources: rnaCrosslinkOO archive

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