CRAN: Package phyloseqGraphTest

phyloseqGraphTest: Graph-Based Permutation Tests for Microbiome Data

Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) <http://www.jstor.org/stable/2958919>, and the tests are described in more detail in Callahan et al. (2016) <doi:10.12688/f1000research.8986.1>.

Version: 0.1.1

Depends: R (≥ 3.5.0), ggplot2 (≥ 2.2.1), phyloseq (≥ 1.24.0)

Imports: ggnetwork (≥ 0.5.1), igraph (≥ 1.1.2)

Suggests: knitr, rmarkdown

Published: 2024年02月05日

DOI: 10.32614/CRAN.package.phyloseqGraphTest

Author: Julia Fukuyama [aut, cre]

Maintainer: Julia Fukuyama <julia.fukuyama at gmail.com>

License: CC0

URL: https://github.com/jfukuyama/phyloseqGraphTest

NeedsCompilation: no

CRAN checks: phyloseqGraphTest results