Basic Biological Sequence Handling [R package microseq version 2.1.7]

microseq: Basic Biological Sequence Handling

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

Version: 2.1.7

Depends: R (≥ 4.0.0), tibble, stringr, dplyr, rlang

Imports: Rcpp (≥ 0.12.0), data.table (≥ 1.9.8)

LinkingTo: Rcpp (≥ 0.12.0)

Suggests: R.utils

Published: 2025年09月18日

DOI: 10.32614/CRAN.package.microseq

Author: Lars Snipen [aut, cre], Kristian Hovde Liland [aut]

Maintainer: Lars Snipen <lars.snipen at nmbu.no>

License: GPL-2

URL: https://github.com/larssnip/microseq

NeedsCompilation: yes

CRAN checks: microseq results

Documentation:

Reference manual: microseq.html , microseq.pdf

Downloads:

Package source: microseq_2.1.7.tar.gz

Windows binaries: r-devel: microseq_2.1.7.zip, r-release: microseq_2.1.7.zip, r-oldrel: microseq_2.1.7.zip

macOS binaries: r-release (arm64): microseq_2.1.7.tgz, r-oldrel (arm64): microseq_2.1.7.tgz, r-release (x86_64): microseq_2.1.7.tgz, r-oldrel (x86_64): microseq_2.1.7.tgz

Old sources: microseq archive

Reverse dependencies:

Reverse depends: micropan

Reverse imports: Rsearch

Linking:

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