CRAN: Package geiger

geiger: Analysis of Evolutionary Diversification

Methods for fitting macroevolutionary models to phylogenetic trees Pennell (2014) <doi:10.1093/bioinformatics/btu181>.

Version: 2.0.11

Depends: ape (≥ 3.0-6), R (≥ 2.15.0), phytools (≥ 1.5-1)

Imports: MASS, mvtnorm, subplex, deSolve (≥ 1.7), digest, Rcpp (≥ 0.11.0), coda, ncbit, colorspace, methods

LinkingTo: Rcpp

Suggests: TreeSim

Published: 2023年04月03日

DOI: 10.32614/CRAN.package.geiger

Author: Luke Harmon, Matthew Pennell, Chad Brock, Joseph Brown, Wendell Challenger, Jon Eastman, Rich FitzJohn, Rich Glor, Gene Hunt, Liam Revell, Graham Slater, Josef Uyeda, Jason Weir and CRAN team (corrections in 2022)

Maintainer: Luke Harmon <lukeh at uidaho.edu>

License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]

NeedsCompilation: yes

Citation: geiger citation info

Materials: README, ChangeLog

In views: Phylogenetics

CRAN checks: geiger results

Documentation:

Reference manual: geiger.html , geiger.pdf

Downloads:

Package source: geiger_2.0.11.tar.gz

Windows binaries: r-devel: geiger_2.0.11.zip, r-release: geiger_2.0.11.zip, r-oldrel: geiger_2.0.11.zip

macOS binaries: r-release (arm64): geiger_2.0.11.tgz, r-oldrel (arm64): geiger_2.0.11.tgz, r-release (x86_64): geiger_2.0.11.tgz, r-oldrel (x86_64): geiger_2.0.11.tgz

Old sources: geiger archive

Reverse dependencies:

Reverse depends: convevol, OUwie, surface, TreeSim, windex

Reverse imports: evobiR, FishPhyloMaker, hillR, hisse, markophylo, nichevol, nodeSub, pmc, PNC, ppgm, ratematrix, RPANDA, secsse, sensiPhy, treats, treedata.table

Reverse suggests: cauphy, diversitree, fishtree, pcmabc, phytools, RNeXML, treestats

Linking:

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