SCpubr: Generate Publication Ready Visualizations of Single Cell
Transcriptomics Data
A system that provides a streamlined way of generating
publication ready plots for known Single-Cell transcriptomics data in
a "publication ready" format. This is, the goal is to automatically
generate plots with the highest quality possible, that can be used
right away or with minimal modifications for a research article.
Version:
3.0.0
Depends:
R (≥ 4.0.0)
Suggests:
assertthat,
circlize,
cli,
cluster,
colorspace,
ComplexHeatmap,
covr,
decoupleR,
dplyr (≥ 1.1.0),
enrichplot,
forcats,
ggalluvial (≥ 0.12.5),
ggbeeswarm,
ggdist,
ggExtra,
ggh4x,
ggplot2 (≥ 3.4.0),
ggplotify,
ggrastr,
ggrepel,
ggridges,
ggsignif, graphics,
infercnv,
KernSmooth,
knitr,
labeling,
magrittr,
MASS,
Matrix, methods,
Nebulosa,
org.Hs.eg.db,
patchwork,
pheatmap,
plyr,
purrr,
qpdf,
RColorBrewer,
rjags,
rlang,
rmarkdown,
scales,
scattermore,
Seurat,
SeuratObject,
sf,
stringr,
svglite,
testthat (≥
3.0.0),
tibble,
tidyr,
UCell,
viridis, waffle,
withr
Published:
2025年08月20日
Author:
Enrique Blanco-Carmona
ORCID iD [cre, aut]
Maintainer:
Enrique Blanco-Carmona <scpubr at gmail.com>
NeedsCompilation:
no
Documentation:
Downloads:
Reverse dependencies:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=SCpubr
to link to this page.