To cite the Patterns package in publications use:
Bertrand F, Maumy-Bertrand M (2025). Patterns: reverse engineering of biological networks with patterned expressions. doi:10.32614/CRAN.package.Patterns, R package version 1.7, https://github.com/fbertran/Patterns.
Bertrand F, Aouadi I, Jung N, Carapito R, Vallat L, Bahram S, Maumy-Bertrand M (2020). “Patterns: reverse engineering of biological networks with patterned expressions.” Bioinformatics. https://doi.org/10.1093/bioinformatics/btaa855.
Corresponding BibTeX entries:
@Manual{,
title = {Patterns: reverse engineering of biological networks with
patterned expressions},
author = {Frederic Bertrand and Myriam Maumy-Bertrand},
year = {2025},
note = {R package version 1.7},
url = {https://github.com/fbertran/Patterns},
doi = {10.32614/CRAN.package.Patterns},
}
@Article{,
title = {Patterns: reverse engineering of biological networks with
patterned expressions},
author = {F. Bertrand and I. Aouadi and N. Jung and R. Carapito and
L. Vallat and S. Bahram and M. Maumy-Bertrand},
year = {2020},
journal = {Bioinformatics},
url = {https://doi.org/10.1093/bioinformatics/btaa855},
}