MCSimMod: Working with 'MCSim' Models

Tools that facilitate ordinary differential equation (ODE) modeling in 'R'. This package allows one to perform simulations for ODE models that are encoded in the GNU 'MCSim' model specification language (Bois, 2009) <doi:10.1093/bioinformatics/btp162> using ODE solvers from the 'R' package 'deSolve' (Soetaert et al., 2010) <doi:10.18637/jss.v033.i09>.

Version: 1.0
Imports: deSolve, methods, tools
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2025年08月19日
DOI: 10.32614/CRAN.package.MCSimMod
Author: Dustin F. Kapraun ORCID iD [aut, cre], Todd J. Zurlinden ORCID iD [aut], Andrew J. Shapiro ORCID iD [aut], Ryan D. Friese ORCID iD [aut], Frederic Y. Bois ORCID iD [ctb], Free Software Foundation, Inc. [cph]
Maintainer: Dustin F. Kapraun <kapraun.dustin at epa.gov>
License: GPL-3
URL: https://CRAN.R-project.org/package=MCSimMod, https://github.com/USEPA/MCSimMod
NeedsCompilation: yes
Citation: MCSimMod citation info
CRAN checks: MCSimMod results

Documentation:

Reference manual: MCSimMod.html , MCSimMod.pdf
Vignettes: (2) MCSimMod Details (source, R code)
(8) Incorporating Events into a Simulation (source, R code)
(7) Using Input Variables (source, R code)
(1) Introduction to MCSimMod (source, R code)
(3) Model Specification (source, R code)
(4) A Model for Newton's Law of Cooling (source, R code)
(9) A Physiologically Based Pharmacokinetic Model (source, R code)
(6) A Classical Pharmacokinetic Model (source, R code)
(5) A Predator-Prey Model (source, R code)

Downloads:

Package source: MCSimMod_1.0.tar.gz
Windows binaries: r-devel: MCSimMod_1.0.zip, r-release: MCSimMod_1.0.zip, r-oldrel: MCSimMod_1.0.zip
macOS binaries: r-release (arm64): MCSimMod_1.0.tgz, r-oldrel (arm64): MCSimMod_1.0.tgz, r-release (x86_64): MCSimMod_1.0.tgz, r-oldrel (x86_64): MCSimMod_1.0.tgz
Old sources: MCSimMod archive

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