A Pipeline for Meta-Genome Wide Association [R package MAGNAMWAR version 2.0.4]

MAGNAMWAR: A Pipeline for Meta-Genome Wide Association

Correlates variation within the meta-genome to target species phenotype variations in meta-genome with association studies. Follows the pipeline described in Chaston, J.M. et al. (2014) <doi:10.1128/mBio.01631-14>.

Version: 2.0.4

Depends: R (≥ 3.0)

Imports: ape, coxme, doParallel, dplyr, foreach, iterators, lme4, multcomp, parallel, plyr, qqman, survival, seqinr

Suggests: knitr, rmarkdown

Published: 2018年07月12日

DOI: 10.32614/CRAN.package.MAGNAMWAR

Author: Corinne Sexton [aut], John Chaston [aut, cre], Hayden Smith [ctb]

Maintainer: John Chaston <john_chaston at byu.edu>

License: MIT + file LICENSE

NeedsCompilation: no

Materials: README, NEWS

CRAN checks: MAGNAMWAR results

Documentation:

Reference manual: MAGNAMWAR.html , MAGNAMWAR.pdf

Vignettes: Using MAGNAMWAR: a case study with *Drosophila melanogaster* (source, R code)

Downloads:

Package source: MAGNAMWAR_2.0.4.tar.gz

Windows binaries: r-devel: MAGNAMWAR_2.0.4.zip, r-release: MAGNAMWAR_2.0.4.zip, r-oldrel: MAGNAMWAR_2.0.4.zip

macOS binaries: r-release (arm64): MAGNAMWAR_2.0.4.tgz, r-oldrel (arm64): MAGNAMWAR_2.0.4.tgz, r-release (x86_64): MAGNAMWAR_2.0.4.tgz, r-oldrel (x86_64): MAGNAMWAR_2.0.4.tgz

Old sources: MAGNAMWAR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=MAGNAMWAR to link to this page.