Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) [R package DSAIDE version 0.9.6]

Andreas Handel

DSAIDE: Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution)

Exploration of simulation models (apps) of various infectious disease transmission dynamics scenarios. The purpose of the package is to help individuals learn about infectious disease epidemiology (ecology/evolution) from a dynamical systems perspective. All apps include explanations of the underlying models and instructions on what to do with the models.

Version: 0.9.6

Depends: R (≥ 4.0.0), shiny (≥ 1.2)

Imports: adaptivetau, deSolve, dplyr, ggplot2, gridExtra, lhs, nloptr, plotly, rlang, stats, utils, XML

Suggests: covr, devtools, emoji, knitr, pkgdown, rmarkdown, roxygen2, testthat

Published: 2023年08月23日

DOI: 10.32614/CRAN.package.DSAIDE

Author: Andreas Handel ORCID iD [aut, cre], Cody Dailey [ctb], Isaac Chun-Hai Fung [ctb], Ronald Galiwango [ctb], Salil Goyal [ctb], Spencer Hall [ctb], Ben Listyg [ctb], Brian McKay [ctb], John Rossow [ctb], Sina Solaimanpour [ctb], Alexis Vittengl [ctb], Henok Woldu [ctb]

Maintainer: Andreas Handel <andreas.handel at gmail.com>

BugReports: https://github.com/ahgroup/DSAIDE/issues

License: GPL-3

URL: https://ahgroup.github.io/DSAIDE/, https://github.com/ahgroup/DSAIDE/

NeedsCompilation: no

Citation: DSAIDE citation info

Materials: NEWS

In views: Epidemiology

CRAN checks: DSAIDE results

Documentation:

Reference manual: DSAIDE.html , DSAIDE.pdf

Vignettes: DSAIDE Package Tutorial (source, R code)

Downloads:

Package source: DSAIDE_0.9.6.tar.gz

Windows binaries: r-devel: DSAIDE_0.9.6.zip, r-release: DSAIDE_0.9.6.zip, r-oldrel: DSAIDE_0.9.6.zip

macOS binaries: r-release (arm64): DSAIDE_0.9.6.tgz, r-oldrel (arm64): DSAIDE_0.9.6.tgz, r-release (x86_64): DSAIDE_0.9.6.tgz, r-oldrel (x86_64): DSAIDE_0.9.6.tgz

Old sources: DSAIDE archive

Linking:

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