CRAN: Package CIARA

CIARA: Cluster Independent Algorithm for Rare Cell Types Identification

Identification of markers of rare cell types by looking at genes whose expression is confined in small regions of the expression space <https://github.com/ScialdoneLab>.

Version: 0.1.0

Depends: R (≥ 4.0)

Imports: Biobase, ggplot2, ggraph, magrittr

Suggests: circlize, clustree, ComplexHeatmap, plotly, Seurat (≥ 4.0), testthat, knitr, rmarkdown

Published: 2022年02月22日

DOI: 10.32614/CRAN.package.CIARA

Author: Gabriele Lubatti

Maintainer: Gabriele Lubatti <gabriele.lubatti at helmholtz-muenchen.de>

License: Artistic-2.0

NeedsCompilation: no

Materials: README

CRAN checks: CIARA results

Documentation:

Reference manual: CIARA.html , CIARA.pdf

Vignettes: CIARA (source, R code)

Downloads:

Package source: CIARA_0.1.0.tar.gz

Windows binaries: r-devel: CIARA_0.1.0.zip, r-release: CIARA_0.1.0.zip, r-oldrel: CIARA_0.1.0.zip

macOS binaries: r-release (arm64): CIARA_0.1.0.tgz, r-oldrel (arm64): CIARA_0.1.0.tgz, r-release (x86_64): CIARA_0.1.0.tgz, r-oldrel (x86_64): CIARA_0.1.0.tgz

Reverse dependencies:

Reverse suggests: SCOPRO

Linking:

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