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MsExperiment
This is the released version of MsExperiment; for the devel version, see MsExperiment.
Infrastructure for Mass Spectrometry Experiments
Bioconductor version: Release (3.22)
Infrastructure to store and manage all aspects related to a complete proteomics or metabolomics mass spectrometry (MS) experiment. The MsExperiment package provides light-weight and flexible containers for MS experiments building on the new MS infrastructure provided by the Spectra, QFeatures and related packages. Along with raw data representations, links to original data files and sample annotations, additional metadata or annotations can also be stored within the MsExperiment container. To guarantee maximum flexibility only minimal constraints are put on the type and content of the data within the containers.
Author: Laurent Gatto [aut, cre] ORCID iD ORCID: 0000-0002-1520-2268 , Johannes Rainer [aut] ORCID iD ORCID: 0000-0002-6977-7147 , Sebastian Gibb [aut] ORCID iD ORCID: 0000-0001-7406-4443 , Tuomas Borman [ctb] ORCID iD ORCID: 0000-0002-8563-8884
Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>
citation("MsExperiment")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MsExperiment")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MsExperiment")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.