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xenLite
This is the development version of xenLite; for the stable release version, see xenLite.
Simple classes and methods for managing Xenium datasets
Bioconductor version: Development (3.23)
Define a relatively light class for managing Xenium data using Bioconductor. Address use of parquet for coordinates, SpatialExperiment for assay and sample data. Address serialization and use of cloud storage.
Author: Vincent Carey [aut, cre] ORCID iD ORCID: 0000-0003-4046-0063
Maintainer: Vincent Carey <stvjc at channing.harvard.edu>
citation("xenLite")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("xenLite")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("xenLite")
Details
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Follow Installation instructions to use this package in your R session.