SIM

This is the development version of SIM; for the stable release version, see SIM.

Integrated Analysis on two human genomic datasets

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DOI: 10.18129/B9.bioc.SIM

Bioconductor version: Development (3.23)

Finds associations between two human genomic datasets.

Author: Renee X. de Menezes and Judith M. Boer

Maintainer: Renee X. de Menezes <r.menezes at nki.nl>

Citation (from within R, enter citation("SIM")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SIM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SIM")

SIM vignette PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Microarray, Software, Visualization

Version 1.81.0

In Bioconductor since BioC 2.3 (R-2.8) (17 years)

License GPL (>= 2)

Depends R (>= 3.5), quantreg

Imports graphics, stats, globaltest, quantsmooth

System Requirements

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Suggests biomaRt, RColorBrewer

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SIM_1.81.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64) SIM_1.81.0.tgz

macOS Binary (arm64) SIM_1.81.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/SIM

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SIM

Bioc Package Browser https://code.bioconductor.org/browse/SIM/

Package Short Url https://bioconductor.org/packages/SIM/

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